Pseudoalteromonas sp. LC2018020214: JG479_11520
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Entry
JG479_11520 CDS
T10970
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pslc03110
]
JG479_11520 (clpB)
Chaperones and folding catalysts [BR:
pslc03110
]
Heat shock proteins
HSP100
JG479_11520 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
IstB_IS21
nSTAND3
TniB
AAA_24
AAA_18
ATPase_2
NBD_SMAX1
bpMoxR
Zeta_toxin
ABC_tran
AAA_7
NACHT
KIP1
Motif
Other DBs
NCBI-ProteinID:
QQM63357
LinkDB
All DBs
Position
1:complement(2592502..2595078)
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AA seq
858 aa
AA seq
DB search
MRLDRFTSKFQSALSDAQSLALGRDHQFIEPVHLMYSLLQQSGSSVRALFAQTGVSADEL
NTKLSQEIEKLFKVEGVGGDVQLSNNMASLINLCDKYAQKRKDKYISSELFVLAACDDKG
PLGDIFRSLNITSTKIETAIKAIRGGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSL
DLGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLK
PALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELH
HSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRII
QLKLEDNALAKEKDEASQKRRTEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELE
QARLDLDVARRASDLQRMSELQYGRIPELERKLDLASQAEMQEMTLLKNQVGEDEIAEIL
SRWTGIPVARMLQGEREKLLQMEDKLHSKVIGQDEAVVAVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL
GSDIIQEQAGNNDYTTLKAKVMEVLINEFRPEFINRIDETVVFHPIANEHIKEIADIQLM
KLRERLTEMGYLLEISDAALERIAASGFDPVYGARPLKRAIQQTIENPLAQKLLNGDYIP
GSVIVIDANDDALVFTKR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagatagatttacaagtaaatttcaatctgcgctttctgatgcgcaatcgcta
gcccttggccgcgaccatcaatttattgaacccgtacatttaatgtattcactactgcag
caaagcggctctagtgtgcgcgcgttatttgcacaaacgggggtcagcgcggatgagctt
aacaccaagctttctcaagaaatagaaaaactatttaaagtagaaggcgtaggtggcgac
gtgcagctatcaaataatatggcttcacttattaacctatgtgacaagtatgcgcaaaaa
cgcaaagacaaatacatatcaagtgaattgtttgtactggcagcatgcgacgataaaggt
ccacttggcgatatattcagatcgttaaatattacctccactaaaattgaaaccgcaatt
aaagcgattcgtggtggtcaaaaagttgatgacccaaatgccgaagaaacacgccaagcg
cttgaaaagtacacgattgatctaactgagcgagcagagcaaggtaagcttgaccctgtt
attggtcgtgatgacgaaattcgccgcacgattcaagtactacaacgccgtactaaaaat
aaccctgtattaatcggtgagccaggtgttggtaaaacagcaatagcagaaggtttagca
cagcgtattattaatggtgaagtacctgaaggattaaaaaacaaacgtgttttatcgctt
gatttaggagcactagttgcgggcgctaaatatcgcggtgaatttgaagagcgtttaaaa
tcagtgttaaacgaattggctaaagaagaaggccaagtcattttatttattgatgaaata
cacactattgtgggtgcaggcaaaagtgatggcgcaatggatgcgggtaatatgctaaaa
cctgctttagcacgcggtgagttacactgtgttggcgcaaccacgcttgatgaataccgt
aaatatatagagaaagacgcagcacttgagcgtcgattccaaaaggtactcattgaagag
ccgtcggttgaagataccattgcaatattgcgtggcttaaaagagcgatatgagctacat
cattcagtagaaattactgatcccgcgattgttgctgcggcgcagttatctcaccgctac
attagcgatcgtcagttaccagataaagcaattgatttaatagacgaagcgggttcttcg
attcgattacaaattgattcaaaaccagagtcgttagataagcttgagcgtcgtattatc
caattaaaattagaagataatgcacttgctaaagaaaaagatgaggcgagtcaaaagcgt
cgcaccgaaatgcaagagttgatcaccgaccttgatgggcaatatcgtgagctagacgaa
atttggaatgctgaaaaagcatcgcttcaaggtacacaagtaattaaagccgagcttgaa
caagcaagattagatttagatgtagcgcgaagagcaagtgatttacagcgtatgtcagag
ctgcaatatgggcgaattccagagcttgaacgaaaacttgatttagcctcacaagccgaa
atgcaagaaatgactctgcttaaaaaccaagtaggtgaggatgaaattgctgaaatttta
tctcgctggacaggtattcctgttgcaagaatgctacaaggtgagcgtgaaaagctgctg
caaatggaagataagttacacagtaaagtaatagggcaagatgaagcggtcgttgctgtt
gctaacgcaataagacgctcacgtgcaggacttgcagatcctaatcgcccaattggttct
ttcttgtttttaggtccaactggtgtgggtaaaaccgagcttacaaaagcactggctggt
tttatgtttgataccgaagatgccatggtgcgtatcgacatgtctgagtttatggaaaag
cactcagttgcacgcctagtgggcgcacctccaggttatgtgggttatgaagagggcggt
tatttaacagaagctgttcgtcgtaaaccttactcagttatattgcttgatgaaatagaa
aaagcacacccagatgtgtttaacattttactgcaagtgttagatgatggccgattaact
gacggacaaggtagaaccgttgattttaaaaatacggttattatcatgacatcaaattta
ggctcagatattatccaagaacaagcgggtaataatgactatacgacccttaaagctaaa
gtaatggaagtattgattaatgagtttagacctgagtttattaaccgtattgatgagact
gttgtattccacccgatagcaaacgagcatataaaagaaatagctgatattcagttaatg
aaattacgtgagcgtttaacagagatggggtatctgcttgaaataagcgatgctgcactt
gagcgaattgcagcaagtgggtttgatcctgtgtacggtgcacgcccgcttaagcgggct
attcagcaaacgattgaaaatccgctagcacaaaagctacttaatggggactacatacca
ggtagcgtgattgttattgatgcaaatgacgacgctttggtatttaccaaacgctga
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