Pseudoalteromonas sp. LC2018020214: JG479_12380
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Entry
JG479_12380 CDS
T10970
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JG479_12380 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pslc03400
]
JG479_12380 (mutS)
DNA repair and recombination proteins [BR:
pslc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JG479_12380 (mutS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QQM63522
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Position
1:2797344..2799929
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AA seq
861 aa
AA seq
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MSFDLYAPHTIKQQTPMMQQYLKIKSEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQT
HRGKAGGDPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPATSKGPVDRKVVRIVTP
GTISDEALLQERQDNLLTSVWQSKKGLYGIAYLDINSGRFNIVEVNTDEAFSSTIQRLSP
AELLYSESFENVHLIEHIKGARRRPEWEFDLDTAQHLLCDQFGTKDLVGFGVDKAHSALV
AAGCLMQYVKDTQRIALPHIRAITLEHNEHAVILDAATRKNLELTVNLSGGFENTLAQVL
DKTATPMGSRLLKRRIHTPIRNKDELNSRLNAISAILDAQLCGELHESLKEIGDVERVIA
RLALCTARPRDLTRLRSALQALAPLHTLLADANDPRIAGIIKHSPELPDLQALLERAVIE
NPPVLIRDGGVIAPGYNSELDEWRNLSKGATDVLDQLESRERERTGISTLKIGYNRVHGF
FIEVSRANAHLVPADYIRRQTLKNNERYIIPELKEHEDKVLGSQSKALALEKQLYEELFR
FIAPHIEQLQMMAAALADLDVLNNLAERAFALNYAKPELCDNDNISIKQGRHPVVEQVMK
EPFIANPVELNSQRKMLIITGPNMGGKSTYMRQTALIVLMAHIGSYVPADSAKIGNIDRI
FTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEIGRGTSTYDGLSLAYATAD
HLASKISAKTLFATHYFELTELAEQTTGLVNVHLDAIEHNDTIAFMHTVLDGAASKSFGL
QVAALAGVPKAVIAQAKQKLKLLENHQSVTAPNTEQQAFTFNNEITQSTPSEVEEQLSAI
DPDNLSPRQAHDLLYKLKALL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatctttatgcaccacacactataaaacaacaaacccctatgatgcagcag
tatctaaaaataaaatcagagcatcgcgatattttattgttttatcgtatgggcgatttt
tacgaacttttttttgatgacgctaaacgcgccgctcaattactcgatatttcgcaaact
catcgtggtaaagctggcggcgatcctatccctatggcgggtgtaccttaccatgcggta
gaaaactacttagcacgtctagtccaaatgggtgaatcagtcgctatctgcgaacaagtg
ggagaccctgcaaccagtaaaggccctgttgatcgtaaagtagtgcgtatagttacaccc
ggtacaatttctgatgaagcacttttacaagaacgacaagacaatctccttaccagcgtt
tggcaaagtaaaaaaggcttatacgggattgcttatttagacattaactctggtcgtttt
aatattgtcgaggtaaataccgacgaagcctttagctcaactattcagcgcctatcacca
gccgaacttctgtatagcgaaagctttgaaaacgttcatttaattgaacatataaaaggt
gctcgccgtcgcccagagtgggagttcgacttagatacggctcagcacttattatgcgat
cagtttggtactaaagatttagttggctttggtgttgataaagcccatagcgcgcttgtt
gctgcaggttgcctaatgcaatacgtaaaagatacacaacgtattgcactgccacatatt
cgtgcaattacgcttgagcacaacgaacacgctgttattttagatgccgctacccgtaaa
aatttagaattaactgttaatttatcgggcgggtttgaaaatacacttgctcaagtactt
gataaaacagcaacgccaatgggttctcgcttacttaagcgccgtattcatacaccaatt
cgtaataaagacgagctaaattcacgtttaaatgcaattagcgctattttagatgcgcag
ctttgcggtgaattacacgaatcattaaaagagattggtgatgtagagcgtgttattgca
cgcctagctttatgtactgcacgcccgcgtgatttaactcgcctgcgcagtgcgctacaa
gcacttgcaccactgcatactttgttagctgacgctaacgatcctcgtatagcaggtatc
atcaagcactcgcctgaactccctgatttacaagcgttattagaacgagctgtgatagaa
aacccaccggtacttattcgtgacggtggtgttattgctccaggttacaatagtgaactt
gatgagtggcgtaacttaagcaaaggtgcaaccgatgtacttgatcaactagagtcacga
gagcgcgaacgtacgggcattagtacgcttaaaatcggttataaccgcgtacatggcttt
tttattgaagtaagtagagctaatgcgcacttagtgccagccgactacattcgtcgtcaa
acacttaaaaataacgaacgttacattattccagagcttaaagagcacgaggataaagta
ctcggcagccaatcaaaagctctcgcgcttgaaaaacaactatacgaggagctgtttaga
tttattgctccacatattgagcagttgcaaatgatggcagcagcattggctgatttagac
gttttaaataatttagctgagcgtgcattcgcactcaattatgcaaaaccagaattgtgc
gataacgacaatataagcattaagcaaggtcgtcaccctgttgttgaacaagtaatgaaa
gaaccgtttattgctaaccctgttgaattaaacagccaacgtaaaatgctaattattacc
ggtccaaacatgggcggtaaatcaacctatatgcgccaaacggcacttattgttttaatg
gctcacattggcagttatgtacccgctgacagcgctaaaattggtaatatcgaccgcata
tttacacgtattggtgcaagcgatgatttagcatcagggcgttcaaccttcatggtagaa
atgaccgaaacagcgactattttaaataatgccacggcacagtctttagtgttaatggat
gagattggtcgcggtacaagtacttacgatggactctctcttgcgtatgcaacagccgat
catttagcatcaaaaatatctgctaaaacattgtttgctacgcactactttgaattaaca
gaacttgctgagcaaaccacgggccttgtaaacgtgcaccttgatgcaatagagcataac
gacactattgcgtttatgcatacagttctcgacggtgcagcaagcaaaagctttggttta
caagtagccgctcttgctggagtgccaaaagctgtgattgcacaagcaaagcaaaaactt
aagttgcttgaaaatcatcaaagcgttactgcaccaaatacagaacaacaagcctttact
tttaataacgaaattacacaaagtacaccttcagaagttgaagagcagttaagcgcaatc
gaccctgataatttatcgccacgccaagcgcacgatttgttatataaactaaaagcattg
ttgtaa
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