Pseudoalteromonas sp. LC2018020214: JG479_12805
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Entry
JG479_12805 CDS
T10970
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00900
Terpenoid backbone biosynthesis
pslc01100
Metabolic pathways
pslc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JG479_12805 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pslc01006
]
JG479_12805 (ispA)
Enzymes [BR:
pslc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JG479_12805 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JG479_12805 (ispA)
Prenyltransferases [BR:
pslc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JG479_12805 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF3804
Motif
Other DBs
NCBI-ProteinID:
QQM63600
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All DBs
Position
1:2882505..2883392
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AA seq
295 aa
AA seq
DB search
MSINNYIERAQKDVVATLQQHFKQPLDTEETVKNATQYGLFNGGKRLRPFLVYATGKMLG
ANQQDLHVLAAAIECIHSYSLVHDDLPAMDDDDLRRGRPTCHIEFGEANAILAGDALQTL
AFELIANHKFTCSSQTQVKMIATLAHASGLEGMVGGQGLDIAATDKVITVQELERIHKLK
TGALINCAITLGALCSEKADQQTLENLSIFGYAIGLAFQVHDDILDVEGDTVTLGKPQGS
DIAANKATYPALLGMLGAKEKAQNLIQQAHEALANIDADTTLLASLANYLIERDH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgagcataaataattatatcgaacgtgctcaaaaagatgtagtagcgaccttacagcag
cattttaaacagcctctcgatactgaagaaacggtaaagaacgccacccagtatggatta
tttaatggcggtaaaagattacgtccatttttagtttatgccacaggtaaaatgctcggt
gcaaaccagcaagacttacatgtacttgctgctgcaattgagtgtatccatagctattcg
ctagttcatgatgatttgcctgctatggacgatgacgacttacgccgtggccgccctact
tgccatatagaatttggcgaggcaaatgcaattttagccggtgatgccctacaaacactc
gcctttgagcttattgcgaatcacaaatttacatgctcgtcgcaaacacaagtaaaaatg
attgctacgcttgcccacgcatcaggccttgagggcatggtaggcggacaaggtcttgac
atagcagcaacagataaagtaattaccgtacaagagcttgagcgaatacataagctaaaa
acaggagctttaattaattgtgcaattacacttggtgcactgtgcagtgaaaaggcagat
caacaaaccttagaaaatttaagcatttttgggtatgctatagggctggcgtttcaagta
cacgacgacattttagatgttgaaggcgatacggttactttaggtaaaccacaaggctcc
gatattgccgcgaataaagcgacatatccggcgttattaggtatgctaggcgctaaagaa
aaggcgcaaaatttaatacaacaagcccatgaagcgttggcaaatatagatgctgacaca
acacttcttgcgtcgctagcaaattacctaattgagcgtgaccactaa
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