Pseudoalteromonas sp. LC2018020214: JG479_12860
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Entry
JG479_12860 CDS
T10970
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00260
Glycine, serine and threonine metabolism
pslc00460
Cyanoamino acid metabolism
pslc00630
Glyoxylate and dicarboxylate metabolism
pslc00670
One carbon pool by folate
pslc00680
Methane metabolism
pslc01100
Metabolic pathways
pslc01110
Biosynthesis of secondary metabolites
pslc01120
Microbial metabolism in diverse environments
pslc01200
Carbon metabolism
pslc01230
Biosynthesis of amino acids
pslc01240
Biosynthesis of cofactors
pslc04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JG479_12860
09102 Energy metabolism
00680 Methane metabolism
JG479_12860
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JG479_12860
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JG479_12860
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JG479_12860
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JG479_12860
Enzymes [BR:
pslc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JG479_12860
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
SapB_1
Motif
Other DBs
NCBI-ProteinID:
QQM63611
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Position
1:complement(2894982..2896238)
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AA seq
418 aa
AA seq
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MLERSMNISDFDPELFDAINKETARQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRANELFGSDYANVQPHAGSQANAAVFLALLEAGDTVLGMS
LAHGGHLTHGSHVSFSGKLYNAIQYGLDETTGEIDYAQVEALALEHKPKMIIGGFSAYSG
IVDWAKFREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPHAHVVTTTTHKTLAGPRGGLI
ISACGDEAIYKKLNSAVFPGGQGGPLCHVIAAKAVAFKEALQPEFKVYQTQVVKNAKAMV
AVMQERGYKIVSDKTENHLFLLDLIDKDITGKDADAALGNANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEEESKELAGWICDVLDNITDESVQAQVKEKVKAICAKLPVYA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgtagcatgaatatttcggattttgatccagagttatttgacgcgataaac
aaagaaactgctcgccaagaagagcacattgaactaatcgcttcagaaaactactgtagc
ccacgcgtactagaagcgcagggttcacagcttacaaataaatacgcagaaggttaccct
ggcaaacgttattatggcggttgtgagcacgttgatgttgttgagcaattagcaattgac
cgtgctaacgagttatttggttctgactacgcaaacgtacaaccacatgctggttcgcaa
gctaatgctgctgtttttctagcgctattagaagcaggcgacactgtacttggtatgagc
ttagctcatggtggtcacttaactcacggatcacacgtaagcttctctggtaagctttac
aatgcaattcaatacggactagatgaaacaacgggcgaaattgattacgcacaggttgaa
gcactagcacttgagcataaaccaaaaatgattattggtggtttctcagcgtactcaggt
attgttgattgggctaaattccgtgaaattgctgacaaagtaggtgcttacctgtttgtt
gatatggctcacgttgcaggtttaattgcggcaggcgtttacccaagcccagttcctcat
gcacatgttgtaactacaactacacataaaacacttgctggtcctcgtggtggtttaatt
atctctgcatgtggcgacgaagcaatctataaaaagcttaacagcgcagttttccctggt
ggccaaggtggtcctttatgtcatgttattgcagcaaaagcagtggcatttaaagaagcg
cttcaaccagaatttaaagtataccaaacacaagttgttaaaaacgcaaaagcaatggtt
gctgtaatgcaagagcgcggctacaaaattgtatctgacaaaactgaaaaccacttattc
ctactcgatttaatcgataaagatattactggtaaagatgcagatgcagcccttggtaac
gctaacatcacagttaacaaaaactcagtgccaaacgatccacgttctccgtttgtaaca
tctggtttgcgtattggttctcctgcaatcactcgtcgtggtttcaaagaagaagaatca
aaagagcttgctggctggatttgtgacgtactagataatatcactgatgaatctgtacag
gcgcaagttaaagaaaaagtaaaagcaatttgtgcaaaattacctgtttacgcttaa
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