Pseudoalteromonas sp. LC2018020214: JG479_13660
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Entry
JG479_13660 CDS
T10970
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pslc03036
]
JG479_13660 (xerD)
Chromosome and associated proteins [BR:
pslc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JG479_13660 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QQM63752
LinkDB
All DBs
Position
1:complement(3069531..3070457)
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AA seq
308 aa
AA seq
DB search
MTTLSDDSFENNSSMSSNSDYLETFLDSLYLEQGVSENTLSAYRSDLDKFCLFLKGENLM
TVTGLDIESYLAHRVDLGLKPRSTARSISALKRFYQYFVREKIISDSPMLNIAQPKAGQS
LPKTLSEAEVEALLNAPNTEEAMGLRDKAMLELLYATGLRVSELVGLRMEQINLRQAVVF
VKGKGNKERLVPLGEEAMYWLEQFLKGGRAQMIKHATDFVFPSKRGVGMTRQTFWHRIKH
YAILASVESPLSPHTMRHAFATHLLNHGADLRVVQMMLGHSDLSTTQIYTHVANERLKSV
HAEHHPRA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacgctatctgacgattcttttgaaaataacagcagtatgagcagtaatagcgac
tacctagaaacctttttagatagcctgtacttagaacaaggcgtaagcgaaaatacatta
agcgcttatcgcagtgatttagataagttttgcctatttttaaagggcgaaaatttaatg
acggtaacggggctcgacatagaaagctatttagcgcatcgagttgatttaggtttaaaa
ccacgcagtacagcacgtagcattagtgcgctaaagcgtttttatcagtactttgtgcgc
gaaaaaataattagtgattcgcccatgctaaacatagctcaaccaaaagccggacagtcg
ttacctaaaacactctcagaagctgaagttgaggcattgttaaatgcgcccaacacagaa
gaagcgatgggactgcgcgacaaagccatgctagagctactttatgcaacggggttgcgt
gtaagtgagcttgttgggcttcgtatggagcaaattaatttgcgccaagcggtggtgttt
gtaaaaggtaaaggtaacaaagagcgcttagtgccattgggtgaagaagccatgtattgg
ctggagcaatttttaaagggtgggcgtgcacaaatgataaaacacgccaccgattttgtg
ttcccatctaagcgcggagtaggcatgacgcgacaaaccttttggcatagaattaaacac
tatgctattttggcatcagttgagtctccattatcgccccataccatgcgccatgctttt
gctacgcacttattaaatcatggggcagatttacgtgtggtacaaatgatgttgggccat
agcgatttatcaacgacgcaaatttatacccatgttgccaatgaacggttaaagtcggta
cacgcagagcatcatccgcgagcgtaa
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