Pseudoalteromonas sp. LC2018020214: JG479_13780
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Entry
JG479_13780 CDS
T10970
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JG479_13780 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pslc03019
]
JG479_13780 (recQ)
03400 DNA repair and recombination proteins [BR:
pslc03400
]
JG479_13780 (recQ)
Enzymes [BR:
pslc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JG479_13780 (recQ)
Messenger RNA biogenesis [BR:
pslc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JG479_13780 (recQ)
DNA repair and recombination proteins [BR:
pslc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JG479_13780 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
HEM4
Motif
Other DBs
NCBI-ProteinID:
QQM63775
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All DBs
Position
1:3093178..3095001
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AA seq
607 aa
AA seq
DB search
MNTSTPPSSTLVRKPETVLKQVFGYSEFRDGQKAVIDAAINGQDSLVLLPTGGGKSVCYQ
IPALVLEGVTIVISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQGQIKL
LYVAPEKVLQREFLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFAHVPMM
ALTATADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQS
GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM
GINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE
QRRRVEEQRFNAMASFAEAQTCRRQILLNYFSEYQREPCGNCDICLNPPKSFDGTLVAQQ
ALSCVYRAGQRFGLGYIVELLRGANTSRIRDNNHHELSTYGIGKDKSSEFWLSILRQLIH
QGLLSQDITQGASLRLTEAARVILKGEYALQLAEPRLQAKHVYQDKLAQFNYDKKLFARL
RALRKELADADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGEFLTAI
RHYLATN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatcaactccaccttcgagcacccttgtgcgtaaacccgaaactgtcctcaaa
caagtgtttggctacagtgaatttcgcgacggtcaaaaagcagttattgatgccgctatt
aacggccaagattcgcttgtattgcttcctactggcggcggaaaatcggtgtgctaccaa
atccctgctttagtactcgaaggcgtaaccattgttatatctccgcttatatcgctaatg
caagatcaggtaacgcaactgcaagctcttggggtaaaagccgcttacgtcaataacagc
ttagcacgagaagaacagcaattggtgtatcaacagcttcatcaggggcaaattaagctc
ttatatgtggcgcctgaaaaagtattacaacgcgaatttttagagcgtttatcacattta
aatgtgagtttatttgctattgacgaagcgcactgtgtgtcgcattggggtcatgacttt
agacctcactactttcgcttaaacgaattaaagcaacgttttgcacatgtcccaatgatg
gcattaaccgccaccgccgataaagccacacggtttgatatagttgagcaattaaaacta
caacagccttatattcatactggcagctttgatcgccccaatattcgttacaccatagaa
gaaaaatttaaacctatggtgcaattgcttcgctacctaaaggagcaaaaaagccaaagc
ggtattatttattgcaccagccgtaaacgcgtagacgacattgctgaaaagcttgcagat
gcaggactaaacgctgccgcttatcatgctggtatgagtaacgagcaacgacaatttgta
caaaccgggtttgcccgtgacgatatacagatagtggtcgcaaccgttgcttttggcatg
ggcataaacaagcctaatgtgcgttttgtactgcattacgatattccaaaaagtatagag
tcgtactatcaagaaacaggtcgagctgggcgagatggacttgccgcagaagctataatg
tattttgacccagctgatataggtcgcgtaaggcgcttttttgaagacatagacgacgag
caacgccgccgcgtagaagaacaacgctttaacgcaatggcaagctttgccgaagcgcaa
acatgtcgtcgtcaaatattacttaactactttagtgaatatcaacgcgaaccttgtggc
aactgcgatatttgcttaaatccgccaaaaagctttgatggtacgttagtcgcccagcaa
gcactttcgtgtgtgtacagagcgggacaacgttttggacttggttatattgttgaatta
cttcgcggtgcaaacacgagccgcatccgcgataataatcatcatgagttaagtacctac
ggcataggtaaagataaaagcagtgagttttggctcagtattttacgccaacttattcat
caaggcttacttagccaagatataacacaaggtgcgtcacttagattaacagaagccgcg
cgtgtaattttaaaaggtgaatacgcactgcaattagccgagccacgcctgcaagccaaa
cacgtttatcaagataagttagcgcaatttaattacgacaaaaaactctttgctcgcctg
cgcgcacttcgtaaagaacttgctgatgccgacgatgtgccaccttatgtagtatttaat
gataaaacgttagccgaaatggcgcagcttatgccaacaaacgacagtgaatttttaaag
gtctcaggtgttggttttactaagttaaataagtacggcggcgaatttttaacggcaatt
cgacattacctagctactaattaa
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