Pseudoalteromonas sp. LC2018020214: JG479_14130
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Entry
JG479_14130 CDS
T10970
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JG479_14130 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pslc03400
]
JG479_14130 (mutM)
Enzymes [BR:
pslc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JG479_14130 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JG479_14130 (mutM)
DNA repair and recombination proteins [BR:
pslc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JG479_14130 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QQM63844
LinkDB
All DBs
Position
1:complement(3174484..3175293)
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AA seq
269 aa
AA seq
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MPELPEVEVSRMGITPHVQNQVVTKVNIYNASMRWPVPDDVYQLEGLIVTSIERRAKYLL
LHCELGSTILHLGMSGNLRVVDKSEPLKKHDHVEFIFGNGKALRLNDPRRFGCCLWQEPG
EVHKLLSKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMDNAVVVGVGNIYANESLFKAG
IHPKREAGKVSLKRYQALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQELLVYGRK
GKPCMTCENELEEIRLGQRSTIFCSNCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggtagaagtgagccgaatgggcatcactccccacgtacaaaac
caagttgttacaaaggtaaatatttacaatgccagtatgcgctggccagtgcccgatgac
gtgtatcaacttgaagggctaattgttacaagtattgaacgacgagctaaatatttactt
ttacattgtgagcttgggagcactattttacatttgggtatgtcaggtaatttgcgtgta
gtagataaaagtgagccgcttaaaaagcatgaccatgtagagtttatttttggcaacggt
aaagcgctgcgcttaaacgatcctcgtcgttttggttgttgcttatggcaagagcccggt
gaagtgcataagctactctctaagcttggacctgagccgcttaccgatgatttttttgct
aaacgcgtgtacgaacaatcgcgcaataaaaaagtaccggtaaagcagtttattatggat
aacgcagtggtggttggtgttggtaatatttacgcgaatgaatcattatttaaagcgggt
atacatccaaagcgagaagcgggaaaagtatcgctcaaacgctatcaagcacttatccct
attataaaagacacgcttgcggcggctattacacaaggtggtacaacgcttaaagacttt
gcacaaagtgatggtaagcctgggtattttgctcaagagttattagtatatgggcgtaaa
ggcaagccatgtatgacgtgcgaaaacgaattagaagaaattagattagggcaacgcagt
actattttttgctcaaattgccaaaagtag
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