Pseudoalteromonas sp. LC2018020214: JG479_16035
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Entry
JG479_16035 CDS
T10970
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pslc03036
]
JG479_16035
Chromosome and associated proteins [BR:
pslc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JG479_16035
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QQM64199
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All DBs
Position
1:3579943..3580887
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AA seq
314 aa
AA seq
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MSDDAPNITALSDHWRTPITLFSDYLKFEKQYSAHTVNQYVSQLGFAALYFSKLCDDWFG
VQGEHIRRYSMALRSKQLSGRTISLKLSCIRSLYKFLKAKNIAEQSHYHNPAIGIKGPKF
AKPLPKNLDVDQMARLLEIPDDEPLAIRDKAMMELMYSSGLRISELVGANMQDISAANGE
ILVRGKGNKERLIPVGKKALDALKKWLTIRPQFAKPDEIAVFLSSQKNRISIRQVRLRMQ
EWGIKQGISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQHLAK
VYDNTHPRAKKRTD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgatgcgcctaatattaccgcgctaagcgaccactggcgtacacccataacg
ctatttagcgattatttaaagtttgaaaaacaatattcagcgcacacagttaatcaatac
gtaagccaactaggctttgcagccctatattttagcaaactatgtgatgactggtttggc
gtacaaggcgaacatattcgccgctacagcatggcactgcgatcaaaacaattaagtggc
cgtacaattagcttaaagctcagttgtattcgcagcttatataagtttttaaaagcaaaa
aatattgccgagcaatcgcattaccataatccggctataggtataaaaggccctaagttt
gcaaagcccctacctaagaatctcgatgtagatcaaatggcacgcttgctcgaaataccc
gacgacgaacctctcgcaattagagataaagcaatgatggagttaatgtattcatcaggg
ctgcgtataagcgagttagttggcgctaacatgcaagatattagcgctgccaatggtgaa
attttagtgcgtggtaaaggtaataaagagcgattaattccggtgggcaaaaaagcgtta
gacgcattaaaaaaatggctcacaatacgccctcagtttgcaaagcccgatgaaatagca
gtatttttaagtagccaaaaaaaccgtatttcgattcgccaagtgcgcctacgcatgcaa
gagtggggaataaaacaaggcattagctcgcaggttcatccgcataagctacgccactcg
tttgcgtcacatattttagaatcatctggtgatttacgcgccgtgcaagagttactaggg
cacagcagtttgtcggctacacaagtgtatacgcatttagattttcaacatctagccaag
gtgtacgacaacactcaccctcgtgcaaaaaaacgaactgattag
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