Pseudoalteromonas sp. LC2018020214: JG479_16110
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Entry
JG479_16110 CDS
T10970
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pslc03009
]
JG479_16110
Ribosome biogenesis [BR:
pslc03009
]
Prokaryotic type
ribosomal protein modification factors
JG479_16110
SSDB
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Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
EAL
Motif
Other DBs
NCBI-ProteinID:
QQM64214
LinkDB
All DBs
Position
1:3593301..3595061
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AA seq
586 aa
AA seq
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MTEKTFIKGKDRDLESSISTMQNKLKALNINVEEALWLNPVANCYSVHIKDSDCGVMFTN
GKGATDKASIASALGEYFERLSCNYFFADFYLGEEFANGEFTHYPSEKWFKVEGDEVPEG
IMDESLWDYFDPERELNASHLFDFNSGNIDRGICTLPYTRQRDNQDVYIPVNVIGNIFVS
NGMSAGNTKFEARVQGLSEVFERAIKNRIIAEGICLPIVPEDVVKQYPKIHEACEELRSH
GFHLRIADASLGGKYPVMSVTLINPTDGSVFASFGAHPSFEVALERTVTELLQGRRLDQL
DVFQPATFDNDEVATPENIELHFIDSSGLISHDFFRAKPDFEFVHWDFSGTTEEEYNFCT
DLIHSMDHDIYIMDYTHLNVYACRILVPGMSDIYPVDELIWRNNNEGAKFRETFLSLDQY
DAEQWMEIYDSLEEAGHSDIIRAAEFIGLATDADTPWHTLRIGELKAHLCLAAGSEEAID
WVDWILHTGQVNEEAMRHFRCLKAVLEIKYDDEREYADYQDALGLMFGANNVALAIEIAE
GKKQFNGLTFPGLSLEGFKKHAALLDGYRKLHVAKQNHWAREVSDS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaaacatttatcaaaggtaaagaccgcgacctagaatcgtcaatctctacc
atgcaaaacaagcttaaagccctaaacattaatgttgaagaagcgctttggcttaaccct
gtagctaactgttattcggttcatataaaagacagcgactgcggtgttatgtttaccaat
ggtaaaggcgcaaccgacaaagcatctattgcttcagcactaggtgaatactttgaacgt
ttaagctgtaactacttttttgcagacttttatctaggtgaagaatttgctaatggcgag
tttactcattacccaagcgaaaaatggtttaaagttgaaggcgatgaagtgccagagggc
attatggatgaaagcttatgggattactttgaccctgagcgcgaactaaacgcatcacac
ctttttgattttaactcaggcaatatcgatcgtggtatttgtaccctgccatacacacgc
caacgcgataaccaagacgtatacattccggtaaacgttatcggtaatatttttgtatct
aacggtatgagcgcaggtaacaccaaatttgaagctcgcgtacaaggtttatcagaagta
tttgagcgcgctattaaaaaccgcatcatcgccgaaggtatttgtttaccaatcgtgcct
gaagacgttgttaagcaataccctaaaattcacgaagcgtgtgaagaacttcgcagccat
ggctttcatttacgtattgccgatgcatcacttgggggcaaataccctgtaatgagcgta
acgcttattaacccaacagatggctctgtatttgcttcttttggtgctcacccatcattt
gaagttgcgcttgaacgtaccgtgactgagttactacaaggtcgtcgtcttgatcagcta
gatgtattccaacctgcaacatttgataacgatgaagtagcaacaccagagaacattgaa
ctgcactttattgattcaagcggtctgatttcgcatgattttttccgtgcaaaacctgat
tttgaatttgtacactgggactttagcggaacaactgaagaagaatataacttctgtact
gatctaattcatagcatggatcatgatatctacatcatggattacacgcacctaaacgta
tacgcgtgtcgtattttagtacctggcatgtctgacatttaccctgttgatgagcttatt
tggcgtaacaacaacgaaggcgctaaattccgcgaaacattcctatcgcttgatcagtac
gatgcagagcaatggatggaaatttacgacagccttgaagaagcaggccacagcgatatt
atccgcgccgcagaatttatcggccttgcaaccgatgccgacacaccatggcacacactg
cgtataggtgagcttaaagcacacctatgtttagctgcaggcagcgaagaagccattgat
tgggttgactggatacttcatacaggccaagtaaatgaagaggcaatgcgccacttccgc
tgtttaaaagcagttcttgaaattaaatacgatgacgagcgcgaatacgccgattaccaa
gatgcattaggcttaatgtttggtgctaataatgtagcgctggctatagaaattgccgaa
ggtaaaaagcagtttaacggtttaactttccctggtttatcgcttgaaggctttaaaaag
catgcggcgctacttgatggttaccgcaagctacatgtagcaaagcaaaatcactgggcg
cgtgaagttagcgactcgtaa
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