Pseudoalteromonas sp. LC2018020214: JG479_16340
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Entry
JG479_16340 CDS
T10970
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pslc03000
]
JG479_16340
Transcription factors [BR:
pslc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JG479_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_DeoR
HTH_11
HTH_36
MarR_2
DUF4423
HTH_24
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QQM64259
LinkDB
All DBs
Position
1:3649932..3650681
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AA seq
249 aa
AA seq
DB search
MSNSMFDHKLSSPSLDFQPLYLQVADSIKQLIVKRHWLPGEALPSEFRLAEEFNVSQGTV
RKALNLLTDNKIVTRRQGVGTFVSEHTSQDALFRFFPLQADGKSDNSPKAELLSVELCAA
PAEAIKALQLNKKDKVTKLVRRRTLDNEFCMSETIYLPQSYFPDIHKSSDIPHTLYHYYQ
SKFNQTVHKTQDSIKAVLATIDDAKMLAIKAGDPLLLVSRITESIEGKRIEYRLSKCRSD
HYHYQIELD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactctatgtttgatcacaaattaagtagcccaagcttggattttcaaccactc
tacttacaagtggctgatagtataaaacaactcattgttaaacggcattggttgcccggc
gaggctttaccaagcgaatttcgccttgctgaagaatttaacgtaagccaaggtactgtt
cgtaaagcgcttaatttattaaccgacaataaaatagtaactcgccgccaaggcgttggg
acatttgtatctgagcatacctcgcaagatgccttattcaggttttttcctttacaagcc
gacggtaaaagtgacaactcaccaaaggcagaactgctatcggttgagctttgtgcagcg
cctgctgaagctataaaggctttgcagctaaataaaaaagacaaggttactaagctagtt
cgcagacgtactctcgataacgaattttgcatgagcgaaactatatacctaccgcaaagc
tactttcctgatatacataaaagtagtgatattccgcacactctatatcattactatcag
agtaaatttaaccaaacggtacacaaaacccaagacagtattaaagccgtacttgctaca
atagatgatgcaaaaatgcttgctataaaagcaggcgatccactgctgttagtatcgcgc
attaccgaatcaatcgaaggtaagcgtattgaataccgcctaagtaaatgccgtagcgat
cactatcattaccaaattgagctcgactag
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