Pseudoalteromonas sp. LC2018020214: JG479_17060
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Entry
JG479_17060 CDS
T10970
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc00061
Fatty acid biosynthesis
pslc00071
Fatty acid degradation
pslc01100
Metabolic pathways
pslc01212
Fatty acid metabolism
pslc02024
Quorum sensing
pslc04146
Peroxisome
Module
pslc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JG479_17060 (fadD)
00071 Fatty acid degradation
JG479_17060 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JG479_17060 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
JG479_17060 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pslc01004
]
JG479_17060 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pslc04147
]
JG479_17060 (fadD)
Enzymes [BR:
pslc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JG479_17060 (fadD)
Lipid biosynthesis proteins [BR:
pslc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JG479_17060 (fadD)
Exosome [BR:
pslc04147
]
Exosomal proteins
Exosomal proteins of breast milk
JG479_17060 (fadD)
Exosomal proteins of breast cancer cells
JG479_17060 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QQM66301
LinkDB
All DBs
Position
2:complement(123731..125383)
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AA seq
550 aa
AA seq
DB search
MEKIWLKRYPKGMPETIDPEHYNSLLEVFEKSFSDYTDLPAFTNMGKTMSYDEIDTATKK
VASYIQNDLGLKKGDKVAVMMPNLLQTPVTILGVLRAGCVVVNVNPLYTVRELEHQLKDS
DTTAIFILANFADTLEKSLAHTDVKHIVVTQVGDMVGGLKKHVVNFVVKHIKKMVPKFNL
PNTIKFSDVLAADEAKYTRPEMSLSDLAFLQYTGGTTGVSKGAMLSHGNMVGNLEQVSGC
LDKVLNRGEEVVVTALPLYHIFALTANCLTFMKYGGLNILITNPRDMPGFVKELGQHNFT
AITGVNTLFNGLLNTPGFAELDFSHLKMSLGGGMAVQRPVAEKWQKVTGSKLMEGYGLTE
CSPLVTISPFDLKAYNGSIGLPAPNTDIKLVLDNGEEAAKGEPGELCVKGPQVMVGYYKR
PDATAECLKDGWFATGDIATYDDEGFFFIVDRKKDMIIVSGFNVFPNEIEEVVAMHEGVL
EVAAIGIPHDVSGEQVKVFVVKKDPSLTEKDIISHCRDNLTNYKVPKLVEFRDELPKTNV
GKILRRALKD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaatctggcttaagcgctacccaaagggtatgcctgaaacaatcgatcctgag
cattacaactcgttactcgaagtgttcgaaaaaagttttagtgactacaccgatttacct
gcatttacgaatatgggtaaaacgatgtcttacgatgaaatagacacagcaacaaaaaaa
gttgcttcctatattcaaaatgatttgggtcttaaaaaaggcgataaagtcgccgtaatg
atgcctaacttactacaaacaccagtcacaattttaggtgttttgcgtgcaggttgtgtg
gttgtaaatgttaacccactttacacggtacgtgaattagagcatcagctaaaagactct
gacactacggctattttcatcctagcaaactttgctgacacacttgaaaagtcacttgct
catactgatgttaagcatattgtggtcacgcaagtaggcgatatggttggcgggcttaaa
aagcatgtagttaactttgttgtgaagcacattaaaaaaatggtgccaaagttcaacttg
cctaacacaattaaattttcagacgttttagctgcagatgaagctaaatacacgcgccct
gaaatgagcttgtctgatcttgcatttttacagtacaccggtggcacaacaggtgtatct
aaaggggcaatgctgagccatggcaacatggttggtaaccttgaacaagtttcaggttgt
ttagacaaagtgttaaaccgtggtgaagaagtggttgtgactgctttaccgctttatcat
atatttgccttaacagctaactgcctaacatttatgaagtacggtggtttaaatatatta
attacaaacccacgagatatgcctgggtttgttaaagagctgggtcaacacaatttcaca
gctattaccggtgttaatacattatttaatggtttattaaacacaccaggttttgctgaa
cttgattttagtcatttaaaaatgtctttaggcggcggtatggccgttcaacgtcctgtt
gctgaaaaatggcaaaaagtgactggctcaaaattaatggaaggttatggccttacagaa
tgttctcctttagttactattagtccttttgatttgaaagcatacaatggctctatcggt
ttacctgcgcctaacactgatattaaattagttttagataacggcgaagaagctgctaaa
ggtgaacctggcgagctttgtgttaaaggcccgcaagtaatggtgggctattacaagcga
ccagatgcaacagctgaatgtttaaaagatggctggtttgcaacaggtgatattgcaact
tatgacgatgaaggtttcttctttattgtagatcgcaaaaaagacatgatcattgtatct
ggctttaatgttttccctaatgagatagaagaggtagtggctatgcacgaaggtgtgctt
gaagttgctgctattggtattcctcacgatgtaagtggtgaacaagttaaagtttttgtt
gttaaaaaagacccttctttaactgaaaaagatataataagtcactgtcgtgataattta
actaattacaaggtcccaaaactggtagagtttagggatgagttacctaaaactaacgta
ggtaaaatactccgaagagccttgaaagattag
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