Pseudoalteromonas sp. LC2018020214: JG479_17285
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Entry
JG479_17285 CDS
T10970
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pslc03400
]
JG479_17285 (phrB)
Enzymes [BR:
pslc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JG479_17285 (phrB)
DNA repair and recombination proteins [BR:
pslc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JG479_17285 (phrB)
Prokaryotic type
JG479_17285 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF3891
Motif
Other DBs
NCBI-ProteinID:
QQM66343
LinkDB
All DBs
Position
2:complement(175821..177215)
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AA seq
464 aa
AA seq
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MDTLFWFRRDLRLFSNEALIQALNNGAKHAIFFVSEKQWQQHQAAPIQIDLLKRRVTYLQ
SQLADYGITLHIIEAPSFCDCTRELINFCKANDVKHVIANTEYELNEVNRDKAILHECDE
LSITFTLHEGDLIAPVGTVKNQSNEMYKVFTPFKRAWLKQYQNTHFSLPQWPLTSDPIEF
DESDLLKSDGCSDKWPVDDETLSTVVDNFICDKLTSYDDQRDIPSVKGTSGLSPYLALGI
VSTKQLLINIQQRYPDILTTSKSKTFTWINELVWREFYRHLIAEFPKLSRGDNFNEKYNA
VVWRKSESDFKAWCEGRTGYPLVDAAMLQLKQTGWMHNRLRMVVASFLTKHLLIDWREGE
RFFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRVFNPIRQSERFDPTGKFIRKYLPELE
NVPDKHIHFPHTYLAATGKDKECYWPAIVDHKAARERALAAFKV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggatacattattttggtttaggcgcgatttgcgccttttttctaatgaagcgttaatt
caagcgctaaataatggcgctaaacacgccattttttttgtgtctgaaaaacagtggcaa
caacaccaagctgcgcctattcagattgacttactcaagcgccgagttacttatcttcaa
tcacaacttgctgattacggtattactttacatattattgaagcgcctagcttttgtgat
tgtacgcgcgagcttattaacttttgtaaagcaaacgatgtaaaacacgtaattgctaat
acagaatatgagcttaatgaagtaaaccgcgataaagcaattttgcacgaatgcgatgag
ctttctattacttttactttgcacgaaggtgatttaattgcacctgttggaacggttaaa
aatcaaagtaatgaaatgtataaagtgtttactccctttaaacgtgcatggttaaagcag
tatcaaaatacacactttagtttgccacaatggcctttaacttctgaccctattgagttt
gacgagagtgatttactaaaaagtgatgggtgctcagataagtggccggttgacgacgaa
acactctctaccgtagttgataattttatatgcgacaaacttacaagttacgatgaccag
cgtgatattcccagtgtaaaaggcacatcgggtttaagtccgtatttagcactaggtatt
gtaagcacaaagcaactgcttattaatattcagcagcgttatcctgatattttaactaca
tcaaaaagtaaaacgtttacgtggattaacgagcttgtttggcgcgaattttacagacat
ttaattgctgaatttccgaagctttcgcgcggcgataactttaacgaaaagtataatgct
gtagtgtggcgtaaaagcgaaagcgattttaaagcatggtgcgaagggcgtacaggttac
ccattagtggatgcagcaatgctacaacttaagcaaaccggttggatgcataatcgttta
cgaatggttgttgcaagctttttaactaagcatttattaatagactggcgtgaaggtgaa
cgcttttttatgcagcacttaattgatggcgatttagcctcaaataatggtggttggcag
tgggctgcaagtacgggctgtgatgctcagccttattttagagtttttaatccaatcaga
caaagcgagcgctttgatccaacgggcaagtttatccgtaagtatttgccagagcttgaa
aacgtgccagataaacacattcattttccacacacttatttagccgcaacaggcaaagat
aaggaatgttactggccagcaatagttgatcataaagcggcacgagaacgtgcacttgct
gcatttaaggtgtga
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