Pseudoalteromonas sp. LC2018020214: JG479_17975
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Entry
JG479_17975 CDS
T10970
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pslc02000
]
JG479_17975
01504 Antimicrobial resistance genes [BR:
pslc01504
]
JG479_17975
Transporters [BR:
pslc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JG479_17975
Antimicrobial resistance genes [BR:
pslc01504
]
Gene variants
Tetracycline resistance genes
Transporters
JG479_17975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_H_antiporter
DcuC
DUF6627
Motif
Other DBs
NCBI-ProteinID:
QQM66475
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All DBs
Position
2:346017..347399
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AA seq
460 aa
AA seq
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MLEPSALSLLPPLVVVVLAVVLRRPILSLLIGALVGLVIADPAQVLTNFASTSLKVMTDE
TIGWLILVCGGFGALIALLVRTGGASAFGKLALKYTKGKRSSLFMTFCLGVVIFIDDYLN
ALTVGETMKRITDKFKVSREMLAYVVDSTAAPICVLVPLSTWAVFFGGLLVDNGIAEEGK
GIAVYIQAIPYMFYAWFAVLVVLLVVLGIIPAIGPMKKAEQMAQIEQAQVDPAQYNDVQT
ADEYAVKAVEENFEDADPKGKLRNFLVPIIVLVAFTVYFEIDVYKGLLATMAVTLPFYAL
QKLMSVSEMIERMLDGFKSMIPAIGTVIAAFIFKDVCDLIGLPQFVIGSLSPYMTAAYLP
AVVFISMAILAFATGSSWGIFAVSIPIVMPLANAVDANIPLVIGALLSASSFGSQACFYS
DSTVLAAQGSGCNLMSHAVTQLPYTLIAAALAVIGFLIMA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccttctgcgttaagtttactgccaccgttagtggtggttgtattggctgtt
gtattacgccgccctattttatctttacttattggtgctttagttggtttagttatcgcc
gatcctgcacaggtacttactaactttgcgagtacatcgctaaaagtgatgacagacgaa
accatcggctggctaatacttgtatgtggtggctttggtgctttaatcgcgctattagtg
cgcacaggtggcgcatcggcttttggcaagttagcccttaaatacactaaaggtaaacgc
tcatctttgtttatgaccttttgtttgggtgtagttatttttattgatgactacttaaat
gcgcttaccgtgggtgaaaccatgaaacgcattaccgataaatttaaagtgagccgtgag
atgcttgcctatgttgtagactctactgctgcaccaatttgtgtacttgtccctttatct
acttgggcggttttttttggtggcttactcgtagataacggtattgctgaagaaggcaaa
gggattgcagtttatatccaagccataccgtatatgttttatgcgtggtttgcagtgctt
gttgttttacttgttgtgctgggtattattcctgcgattggtccaatgaaaaaagcagag
caaatggcacaaattgagcaagctcaagtcgatccagcccaatacaacgacgttcaaaca
gcagatgaatatgcagtaaaagccgtagaagagaactttgaagatgctgatcctaaaggt
aaattacgtaactttttggtgccgattattgtactggttgcatttactgtttactttgaa
atagacgtatacaaaggcttattagcaacaatggcggtcactctcccgttttatgctcta
caaaaattaatgagcgtaagtgaaatgattgaacgcatgcttgatggctttaaaagtatg
atccccgcgattggtactgttatagcggcgtttatatttaaagatgtatgcgacttaatt
ggtttgcctcagtttgttattggtagcttaagcccttatatgaccgcagcatatttacca
gccgtggtatttatttcaatggctattttagcgtttgcaactgggtctagctggggtatt
tttgctgtatcaattcccattgttatgccactggcaaatgcggttgatgcaaacatacca
ctggtcattggtgcgctattatcggcttcctcttttggtagccaagcgtgtttttactca
gattcaaccgtactcgcagcgcaaggttctggttgtaatttaatgagccatgctgttaca
caattgccatacacgctaattgctgcggcattagctgttataggctttttaataatggct
taa
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