Pseudoalteromonas sp. LC2018020214: JG479_18270
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Entry
JG479_18270 CDS
T10970
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JG479_18270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pslc03000
]
JG479_18270
03400 DNA repair and recombination proteins [BR:
pslc03400
]
JG479_18270
Enzymes [BR:
pslc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JG479_18270
Transcription factors [BR:
pslc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JG479_18270
DNA repair and recombination proteins [BR:
pslc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JG479_18270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
HhH-GPD
NPP-6_helical
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QQM65874
LinkDB
All DBs
Position
2:complement(413335..414687)
Genome browser
AA seq
450 aa
AA seq
DB search
MDTSHWQKARQSRDPRFDGLFYVAVKSTGIYCRPICPAPTAHEKNVAYYQFAHNAAQDGF
RPCIRCRPDSAPGSAAWQGTKTTALRAKQLIDQNDEHDCEKLAARLGISSRYLRQLFKQY
FGMSITQYRLFNQCHFAKKLIQETHLPLTEIAFAAGFKSIRRFNDAFLQQLNIAPSKLRS
GDKKPTSTLILTLPFRPPYNWPALQGFLQRRLIKPMEWITQTSYGRTFASDKYKGSFTAE
FIASKNHFSVSINIDNTAYLQTVINNIRRVLDLDADINLIETHLSANINNAFTVCEGLRL
PGIWSSFEAGIRAVLGQQVSVTAAHNLVTKLVDELGEKEGDAVYFPTAKIVTNSDFAFFK
MPQARKNALHNLAQFCALNPENDDLDEWLSLKGIGPWTVNYAKLRGQSQPDILLDGDLGV
KKAQAAANPFEPANCAPFRSYLTFQLWQQL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcacattggcaaaaagcacgtcagagtcgcgatcctcgttttgacgggctt
ttttacgtagcggtaaaaagtaccggtatttattgcagaccaatttgccctgcaccaacg
gctcacgaaaaaaacgttgcttattatcagtttgcccataacgcggcgcaagatggtttt
aggccctgtattcgttgcaggcccgatagtgcccctggcagcgcagcatggcagggtaca
aaaacgactgcacttagagcaaaacagttaatagatcaaaatgatgaacacgactgcgaa
aaattagcagctcgtttaggtataagtagtcgttatttaaggcagttgtttaagcagtat
tttggcatgtcgattacgcaatatcgattatttaaccaatgccactttgctaaaaaactg
attcaagaaacacatttaccccttaccgaaatagcgtttgccgcaggctttaaaagcatt
aggcgttttaatgatgcatttttacagcagttaaatatagctccctcgaagctgcgcagt
ggcgataaaaagccaacgtcaacactcattttaaccctgccatttaggccgccttataat
tggcctgctttgcagggctttttacaaaggcgcttgataaaaccaatggagtggataaca
caaacgagctacgggcgtacttttgcaagtgataaatataaaggaagttttaccgcagaa
tttatagcgagtaaaaaccactttagtgtatctatcaatatagacaatacggcgtactta
caaactgttataaataatatacgccgtgtgcttgatttagatgccgatattaatttaatt
gaaacgcatttaagcgccaatataaacaatgcctttacagtgtgtgaagggctcagactt
ccagggatttggtcaagttttgaagccggtataagagcggtacttgggcaacaagtgagt
gttactgcggcgcataatttagtaacaaagttagttgatgaattaggcgaaaaagagggc
gatgccgtttattttcctacggctaaaattgttactaatagtgattttgcattttttaaa
atgccacaagcacgcaaaaatgcgctacacaacttagcccagttttgtgcactaaatcct
gaaaatgacgatttagacgaatggcttagtttaaagggaattggtccttggacagtaaat
tatgcaaagctgcgaggacaaagccaacccgatatattacttgatggcgacttaggtgtt
aaaaaagctcaagcggcggcaaacccgtttgagcctgctaattgcgctccttttcgctct
tacttaacgtttcaactttggcagcaattataa
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