Pseudoalteromonas sp. LC2018020214: JG479_19035
Help
Entry
JG479_19035 CDS
T10970
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
pslc Pseudoalteromonas sp. LC2018020214
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pslc03000
]
JG479_19035
Transcription factors [BR:
pslc03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
JG479_19035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
HTH_23
HTH_40
URGCP
Sigma70_r4
HTH_10
HTH_38
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QQM66020
LinkDB
All DBs
Position
2:complement(589448..590137)
Genome browser
AA seq
229 aa
AA seq
DB search
MPHKNSVFVKTTFQSSFHLHNYATILRTLQALFGDIKMDDVLPKIELRANYDLFLIDGAK
SKWQDLIPADLICLAKHYSVVIFNVDKEDVCEQNLLLNHFNGVFYKSDAPEDIFKGLIRV
DTGELWFTRKVISKAFNDILAVATSFNNLHGDIELKQDYYEHLTKREKSVIHLIAQGASN
NTIADKLSISDHTVKTHLYSAFKKTNSRNRVELANWAQRYISVLLPMGK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccccataaaaactcggtattcgtaaaaacaacatttcaatcctcttttcatttacat
aactacgccactattttaaggacactacaagccctgtttggtgatattaaaatggatgat
gttttgcctaaaatagagttgcgtgcaaattatgatttatttttaatagatggtgctaaa
agtaaatggcaagatctcattcccgcagaccttatttgtttagctaaacactatagcgtt
gttatctttaatgttgataaagaagatgtgtgcgagcaaaacttattgcttaaccatttt
aatggtgttttttataaatcagatgcgccagaagatatttttaaagggttaattcgtgtt
gatactggcgagctttggtttacgcgtaaagtaatttcaaaagcttttaacgacatttta
gccgtggcaacgtcatttaataacctacacggcgacattgaattaaagcaggactattac
gagcatttaacaaagcgggaaaagtctgttattcatttaattgcacagggtgcgagtaac
aatacaatcgctgataaacttagcattagcgaccacactgtaaaaacacatttgtacagt
gcgtttaaaaaaactaactcacgcaacagggtggagcttgctaattgggcgcagcgctac
atatctgttttgctgccaatggggaaatag
DBGET
integrated database retrieval system
