Pseudomonas sp. LPH1: BHQ29_01355
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Entry
BHQ29_01355 CDS
T10175
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pslp Pseudomonas sp. LPH1
Pathway
pslp03420
Nucleotide excision repair
Brite
Enzymes [BR:
pslp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BHQ29_01355
Transcription machinery [BR:
pslp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BHQ29_01355
Chromosome and associated proteins [BR:
pslp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BHQ29_01355
DNA repair and recombination proteins [BR:
pslp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BHQ29_01355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AQZ32061
LinkDB
All DBs
Position
complement(294178..296487)
Genome browser
AA seq
769 aa
AA seq
DB search
MSLRIAVRELCEFTAKEGDLDLRFTPSPTAQEGMAGHATVVARRGPDYVSELPLIGQFEG
LTVSGRADGFDPEFRLLEEIKTHRGDISRIPANHRLLHWAQVKIYGWLLCQELGFEELDL
AVVYFNVMTQQETVFRERHSAASLGEFFALHCRRYIDWARQEQAHQQARNQVLESLSFPY
GEFRHGQRQLAEAVYRAARDGHYLLAQATTGIGKTLGTLFPQLKAMPGQQLDRLFFLSAK
TPGRRLALDALQRLREPETPLRVLEHVARDKACEHPSKACHGDSCPLAKGFYDRLPAARS
AALKERWLDQQAVRNIAIAHGVCPYYLSQELCRWSDVVVCDYNYYFDLGALLHSLTLINQ
WRVCLLVDEAHNLVERGRGMYSAELDQARFKAMCRDAPKRLKSVLDRVDRHWDQLHREQE
VPYQVYPLAPDLLLAALGKAVSAITDLLTDQPEGNGGELLSFYMDAMLFCRLAESFGPHS
LFDINRDEAGNGRSYSTLCIRNILPAPFLGPRFEDAHSATLFSATLSPSHYYLDLLGLPE
ETQCLDVASPFSAEQLHVQVVRNLSTRYQHRDASLAPICQLMARQYAERPGNYLAFFSSY
QYLEQVLQELRRDHPQIPVWTQSRQMDEAARQGFIERFQIGGRGIGFAVLGGVFGEGVDL
PGERLIGAFVATLGLAQLNPINEEIRQRMDTLFGNGYDYTYLYPGLQKVVQAAGRVIRTP
EDQGVLYLIDDRFARPEVRRLLPTWWQVELLRLPVETTKAPEWRPTVET
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctgcgcatcgccgtgcgcgagctgtgcgagttcaccgccaaggaaggtgacctc
gacctgcgcttcaccccctcgcccaccgcgcaggaaggcatggccgggcacgccacggtg
gtggcccggcgcggcccggattacgtttccgagctgccactgatcggccagttcgagggg
ctgacggtcagcggccgcgccgatggcttcgaccccgaatttcgcctgctggaagagatc
aagacccaccgcggcgacatctcgcgcatcccggccaaccaccgcctgctgcactgggcg
caggtgaagatctacggttggctgctgtgccaggaactgggcttcgaggaactggatctg
gcggtggtgtacttcaacgtcatgacccagcaggaaacggtattccgcgagcgccacagc
gccgcgtcgctgggtgaattcttcgccctgcactgccgccgctatatcgattgggcgcgg
caggaacaggcgcatcagcaggcacgcaatcaagtactggagagtttgagctttccctac
ggcgaattccgccatggccagcggcaactggccgaggctgtgtatcgcgctgcgcgtgac
ggccattacctgctggcgcaggccaccaccggcatcggcaagactcttggcaccctgttc
ccgcagctcaaggccatgcccggccagcagctcgaccgcctgttcttcctcagtgccaag
acgcccggccggcgcctggcactggatgccctgcaacgcctgcgcgaaccagaaacgccg
ctgcgcgtgctggaacacgtggcccgcgacaaggcctgcgaacacccgagcaaggcctgc
catggcgactcctgcccgctggccaagggcttctacgaccgcctgccggcagcgcgcagt
gcggcgctcaaggaacgctggctggatcagcaggccgtgcgcaatatcgccatcgcccac
ggcgtgtgcccctactacctgagccaggagctgtgccgctggagcgacgtggtggtgtgc
gactacaactactacttcgacctcggcgccctgctgcacagccttaccctgatcaaccag
tggcgtgtctgcctgctggtggacgaagcacacaacctggtggagcgcgggcgcggcatg
tacagcgccgagctggatcaggcacgtttcaaggccatgtgccgcgacgcgccgaaacgc
ttgaagagcgtgctggatcgggtcgaccgccactgggatcaactgcaccgcgagcaagag
gtgccctatcaggtctatccgctggcgccggacttgctgcttgccgcgttgggcaaggcc
gtcagcgccatcaccgacctgctcaccgatcaacccgaaggcaatggcggcgagctgctt
agcttttatatggatgccatgctgttctgccgcctggcggaaagcttcggcccgcactcg
ctgttcgatatcaatcgcgatgaggcgggtaatggtcgcagctactccaccttgtgcatc
cgcaatatcctgccggcgcccttccttggcccgcgcttcgaggacgcccacagcgccacg
ctgttctccgccaccctcagccccagccactactacctcgacctgctcggcctgccggaa
gagacccaatgcctggacgtcgcctcgccattcagcgccgaacaactgcacgtacaagta
gtgcgtaacctgtccacccgctaccagcaccgcgacgcctcgctggcgccgatctgccaa
ttgatggcgcgccagtacgccgaacgcccgggcaactacctggccttcttcagcagctat
caatatctggaacaggtactacaggagctgcgccgcgatcacccgcagattccggtatgg
acgcagtcacggcagatggacgaagcggcgcgtcagggctttatcgaacgcttccagatc
ggcggacgcggcatcggcttcgccgtgctcggtggcgtattcggcgaaggcgtggacctg
cccggcgaacgcctgatcggcgccttcgtcgccaccctcggcctggcccagctcaacccg
atcaacgaagaaatccgccagcgcatggacaccctgttcggcaatggctacgactacacc
tacctctaccccggcttgcagaaagtcgtgcaggccgccggccgggtgatccgcacgcca
gaggatcaaggcgtgctctacctgatcgacgaccgcttcgcccgcccggaagtacgcaga
ctgctgccgacctggtggcaggtggagctgctgcgcttgcccgtagaaacgacgaaggcc
cccgagtggaggcctacagtcgaaacctga
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