Pseudomonas sp. LPH1: BHQ29_04450
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Entry
BHQ29_04450 CDS
T10175
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pslp Pseudomonas sp. LPH1
Brite
DNA repair and recombination proteins [BR:
pslp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BHQ29_04450
Archaeal homologous recombinant proteins
BHQ29_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AQZ32596
UniProt:
A0AB72UP21
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Position
958202..961636
Genome browser
AA seq
1144 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVDGALQAPKVELARIA
DGEILTDKIREKESLTAELTGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE
IYGQISQQVYERTKAAEQTLNMLKSRAQGMELLDEAQRTELQAEQQRLSLEESPLLARQQ
ALQAQRRWREALQQAEQQREQARLGLEQAQLARNEAAGELQRLAASEPAARLQPLYLAWQ
QAQQDRQQAQQVLDDLHQQQRHSTEREHQQLWLASRYAQQSLSLRHAELQRLAGQRETLH
ARMSAAPQRERLGELLGSWRVQFDQRGQLLKEQQALHARMAQEGEQLAALQHQRDQLGVQ
QADALKRLEDARASEARQQGELQALLGEGDEAGLRQRWQQLQVQGRVLDRLEQLAQSREQ
TAVQIAELTPRLAQLQLQHSRKNDEITGLRERYKALKQQQADKEKLLEQEQRIQDLEAYR
AQLQPGEACPLCGSHEHPAVSQYQVLNVSATRQALEQCRNELAQLESQGGTLRDELTRLV
TQIAQVQQQLEQASQQAAQQDAQWQQQLTEQALQLSDGAALRELQRQHEQSLTHLQSRLA
SVETGQAQLAQARGAREVAERALAEAQQRQALLARDEENLQVRQAEQGQDLQRLQQALRY
HEQMLLSSLEGFAVELPSDAGLWLDEQEQAWRDWQQAQAQDQQLQEQQREAQRLLVDAEA
QAGHWQQRWQDEGALTLAEPEPSAQPQLALNEAANSLASAQRESDALRGREQSQQTLLLQ
LQQRSSEAEQHWLTALTASPFSDLAAFLAALLEEGERERLAALQARVERALTEASTLLAA
ADAQLQQLAATPQTELALGELDEQLQVLQSELRALSQRQGELRAQLQADETRRSSQQALF
AEISAQESEQRLWQQLNGLIGSADGAKFRKFAQGLTLDHLIHLANRQLTRLHGRYQLARK
GSGELELEVCDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG
TLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPVQLRVHKGVGLGYSRLDARFAV
KEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctcaagaacctcaattccctcaagggcgagtggaagatc
gacttcgctgccgagcctttcgccggtagcggtctgttcgccatcaccgggccgaccggg
gcgggcaagaccaccttgctcgatgccatctgcctggccctgtaccaccgcacgccgcgt
atgagcacgctgtcggccagtggtaacgagctaatgacccggcacaccgccgattgcctg
gccgaagtcgagttcgaggtgaaagggcagggctaccgcgccttctggagccagcgccgt
gcgcgggacaaggtcgacggtgcgctgcaggcgcccaaggtggagctggcgcgtatcgct
gatggcgaaattctcaccgacaagattcgcgagaaggaaagtctgaccgctgaactgacc
ggcctggatttcgagcgtttcaccaagtcgatgctgctcgctcagggtggcttcgcggct
tttctcgaagccaatgccaaccagcgcgccgagctgctggaggaactgaccggcaccgag
atttacgggcagatatcccaacaggtctacgagcgtaccaaggctgccgaacagacactc
aatatgctgaaaagccgcgcccagggcatggagttgctcgatgaagcgcagcgcaccgag
ctgcaggccgagcagcagcgtctgagcttggaggagtcgccgctgctggcccggcagcag
gctctgcaggcccagcgccgttggcgtgaggcgctacagcaggccgagcagcaacgggag
caggcgcgactcggactggagcaggcccagctggctcgtaacgaggcagccggtgaactg
cagcgcctggccgccagtgagccggcagctcgattgcagccgttgtacctggcctggcag
caggcgcagcaggacaggcagcaggcacagcaagtgctggatgacctgcatcagcagcaa
cgccacagcaccgagcgcgagcaccagcagctctggctggccagccgctatgcccagcaa
agcctgagcctgcgtcacgcggagctgcagcgtctggccgggcagcgtgaaacgctgcac
gcacgcatgagcgctgcgccgcaacgggaacgcctgggcgagcttctgggtagttggcgt
gtgcagttcgatcagcgcgggcaactgctcaaggagcaacaggcactgcacgcacgcatg
gcgcaggagggtgaacagctcgccgccttgcagcatcagcgtgatcagctcggtgtgcag
caggccgacgcgctgaagcggctggaggatgcgcgcgccagcgaggccagacagcagggc
gagctgcaggccttgctgggcgagggcgacgaggccggactgcgccagcgttggcagcaa
ctgcaagtgcaagggcgcgtattggatcgtctggagcaactggcgcagagccgcgagcaa
acggctgtacagatcgccgagttgaccccgcgcctggctcagttgcagctacagcactca
cgcaagaacgatgaaatcaccggcctgcgcgagcgttacaaggcgctcaagcaacagcag
gccgacaaggagaagctgctggagcaggagcagcgcattcaggatctggaagcctaccgt
gcccagctgcagccgggcgaagcctgcccgttgtgtggttcgcacgagcatccggcggtc
agtcagtatcaggtgctcaacgtctctgccacgcgccaggcgctggagcagtgccgcaac
gaactggcacaactggaaagccagggcggcaccctgcgtgacgaactgacccggctggtc
acgcagatcgctcaggttcagcagcaactggagcaggcgagccagcaggccgctcagcag
gatgcgcagtggcagcagcaactcaccgaacaggccttgcagctttctgacggcgccgct
ttgcgcgaactgcagcgccagcatgagcagagcctgacgcatttgcagtcacgactcgcc
tcggtcgagaccgggcaggcgcaactggcacaggcgcgtggtgcacgtgaagtggccgag
cgggcgttggctgaagcgcagcagcgccaagcgctactggcgcgtgatgaggagaacctg
caggtgcgacaagccgagcagggccaggatctgcagcgtttgcagcaggcgcttcggtac
cacgagcaaatgctgctgagcagtcttgagggctttgctgttgagttgccgtcggacgct
ggcctctggctggacgagcaggagcaggcatggcgcgactggcagcaggcccaggcgcag
gatcagcaattgcaggagcagcagcgcgaggcgcagcgcctgctcgtcgatgccgaggcg
caggccgggcactggcaacagcgctggcaggacgaaggtgcgctgacgctggctgaaccc
gagccatcggcacagccgcaactggcgttgaatgaggccgccaacagcctggccagtgcc
cagcgcgaaagcgatgcgttgcgcggccgcgagcagagtcagcagaccttgttgctgcag
ctgcagcaacgctcgagcgaagccgagcagcactggctgacggctctgacggccagcccg
ttcagcgatcttgcggcgtttctcgccgcgctgctggaagagggtgagcgagagcgtctg
gcggctttgcaggcacgtgtggagcgcgccctgaccgaggcttcgacgttgttggctgcc
gccgacgcgcagctgcagcagctcgccgccacaccgcagacagagctggcgcttggcgaa
ctggacgagcagttgcaggtactgcagagcgaattgcgtgcactgagccagcgtcagggc
gagctgcgcgcgcagttgcaggccgacgagacgcggcgcagcagccagcaggcgctgttc
gcggaaatcagtgcgcaggagagtgagcagcgcctgtggcaacagctcaacggcctgatc
ggctcagccgacggcgccaagttccgcaagttcgcccagggcctgaccctcgatcatctg
atccacctggccaaccgccaactgacgcgcctgcacggccgctaccagctggcgcgcaag
ggtagcggcgaactcgagctggaggtgtgcgacacctggcaggccgacgtggcgcgtgac
tgccgcacgctgtccggtggagagagtttcctggtcagcctggcgctggccttggcgctg
tccgatctggtcagccacaagaccagcatcgactcgctgtttctcgatgaaggcttcggc
acgctggacggcgagacgctggaggttgccctggatgcgctggacaacctcaatgccagc
ggcaagaccatcggtgtgatcagtcatgtcgaggcgatgaaggagcgtattcccgtgcaa
ctgcgggtgcacaagggcgtcggcctcggttacagccgactcgatgcgcgttttgcggtg
aaggaaggagcgtag
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integrated database retrieval system
