Pseudomonas sp. LPH1: BHQ29_08235
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Entry
BHQ29_08235 CDS
T10175
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pslp Pseudomonas sp. LPH1
Pathway
pslp02020
Two-component system
pslp02025
Biofilm formation - Pseudomonas aeruginosa
pslp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BHQ29_08235
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BHQ29_08235
09142 Cell motility
02040 Flagellar assembly
BHQ29_08235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pslp03021
]
BHQ29_08235
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pslp02035
]
BHQ29_08235
Transcription machinery [BR:
pslp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BHQ29_08235
Bacterial motility proteins [BR:
pslp02035
]
Flagellar system
Flagellar assembly proteins
Stator
BHQ29_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
MarR_2
HTH_30
GerE
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AQZ33276
LinkDB
All DBs
Position
1823364..1824110
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AA seq
248 aa
AA seq
DB search
MTAASGLRMYNKAQAQDSQHQLIERYAPLVKRIAYHLLARLPASVQVDDLIQAGMIGLLE
ASRKYDSSKGASFETFAGIRIRGSMLDEVRKGDWAPRSVHRNSRMVSDAIRVVEARTGRD
AKDHEVAAELQLSLEDYYGILGDTLGSRLFSFDDLLQDGEHGGLHEDAGHTHLEPSRDLE
DERFQAALADAIAGLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRS
RLSEWRAG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagcctctggacttcgtatgtacaacaaggctcaggcgcaggactcccagcac
cagctgatcgagcgctatgcgccgctggtcaagcgcatcgcctaccacctgctggctcgt
ctgccggccagcgtgcaggtcgatgatcttatccaggccggcatgatcggcctgctcgaa
gcctcacgcaaatacgactccagcaagggtgccagtttcgagaccttcgccggtatccgt
attcgcggctccatgctcgacgaggtgcgcaagggtgattgggcgccgcgttcggtgcac
cgcaacagccggatggtcagcgatgccattcgtgtcgttgaggcaagaaccggacgggac
gctaaagatcacgaggttgcggccgaactccaattgagtctggaggattactacggcatt
cttggcgacactttgggcagccgcctgttcagtttcgacgacctgttgcaggacggcgag
catggcgggttgcacgaagacgccggacacactcacctcgaaccttcgcgggacctcgaa
gacgaacgcttccaggcggccttggccgatgccatcgccggtttgccggagcgcgaacgt
ctggtgctggcgctgtattacgatgaagaactgaacttgaaggaaatcggtgaagtgctg
ggggttagcgagtcacgcgtgagccagttgcacagccagtgcgcggcgcgtttgcgctcg
cggctgagtgaatggcgcgctggctga
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