Pseudomonas sp. LPH1: BHQ29_08500
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Entry
BHQ29_08500 CDS
T10175
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pslp Pseudomonas sp. LPH1
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pslp03036
]
BHQ29_08500
Chromosome and associated proteins [BR:
pslp03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
BHQ29_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
BORCS7
Motif
Other DBs
NCBI-ProteinID:
AQZ33322
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Position
1879266..1882754
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSNTRKPVTQASIELIFDNSDNSLVGEYAAFAEISIRRRVTRDGQNTYFLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEELRNFIEEAAGISKYKERRRET
ENRIRRTQENLERLSDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLLALRWQSL
NQQVGSREQVIGDQEVAFEALVAEQRSADASIERLRDGHHELSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLREAEKARLETESHLGHDRTLLATLGEELEMLLPEQEMTA
AAAEESAASLEEAEAAMHGWQEQWDGFNQRSAEPRRQAEVQQSRIAQLEQSLERLAERQR
RLNEELQQLAADPEDAAILELNEQLAAGELEQEALQQVEEQQAERLQQLREELQQAGQAQ
QQAQGELQRLNGRLASLEALQQAALDPGQGAGEWLREQNLLQRPRLAEGLRVEAGWELAV
ETVLGADLQAVLLDDFAGLDFSSLEQGELRLASPASGGARRAGSLMDKIESSHDLSSWLA
GVRPVESLEQALAARVQLADGESLISRDGYWVGRHFLRVRRAAEADSGVLARGQELERLQ
LEREEREAALAQLDERLLTLSDEQRLQEELREQQRRQGQELARQLAELKARLSASQAKAE
QLGLRRRRLQDELQEAAEQREIEQEQLGESRLQLQDALDAMALDNEQRESLLASRDSLRE
RLDRVRQDARQHKDHAHQLAVRVGSLKAQHDSTRQALERLEMQVERLHERREQLSLNLEE
GEAPLEELRIKLEELLERRMAVDDELRQARLALEDADRELRDAEKRRTQAEQQAQLLRSQ
LEQQRMDWQSLNVRRKALADQLAEDNYDLHGVIATLPAEASESAWEEELERMAARIARLG
PINLAAIDEYQQQSERKRYLDAQDADLVEALETLENVIRKIDKETRNRFKDTFDQINGGL
QALFPKVFGGGNAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFSI
FQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSATVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEALAMVEA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaaaagcatcaagctggccggcttcaagtccttcgtcgatccgacgacggtg
agctttcccagcaacatggcggcggtggtcgggcccaatggttgcggcaagtcgaacatc
atcgacgccgtgcgctgggtgatgggtgaaagctcggcgaagaacctgcgtggtgagtcg
atgaccgacgtcatcttcaacggttccaacacacgcaagccggtgacccaggcctccatc
gagctgattttcgacaacagcgacaactcgctggtgggcgaatacgcggccttcgccgag
atttccattcgccgtcgggtgacccgcgacgggcagaacacctacttcctcaacggcacc
aagtgccggcgccgcgacatcactgatatcttcctcggcaccggcctggggccgcgcagt
tactcgatcatcgagcaaggcatgatcagcaagctgatcgaggccaagcccgaggagctg
cgcaatttcatcgaggaagccgccggcatctccaagtacaaggagcgccgccgtgagacc
gagaaccgcatccgccgtacccaggagaacctggagcgcctgagtgacctgcgcgaagag
ctggagcgtcagctcgaacgtttgcaccgtcaggcccaggcggcggagaagtatcaggaa
tacaaggccgaggagcgccagctcaaggcacaactgctggccctgcgctggcagagcctg
aaccagcaggtcggcagtcgtgagcaggtgatcggcgaccaggaagtggccttcgaggcc
ttggtggccgagcagcgcagcgccgacgccagcatcgagcgccttcgcgacggccatcac
gaattgagcgagcgcttcaacctggtgcagggtcgcttctattccgtgggtggcgatatc
gcccgcgtcgagcagagcatccagcatggccagcagcgcctgcgccagttgcaggatgac
ctgcgcgaggcagaaaaggcgcgcctggaaaccgagtcgcatctgggccacgaccgcacc
ctgctggccaccctcggtgaagaactggaaatgctcctgcccgagcaggagatgactgcc
gctgctgccgaggaatctgctgccagcctggaagaggccgaggccgccatgcatggctgg
caggagcagtgggacggcttcaaccagcgcagcgctgaaccgcgtcgtcaggccgaagtg
cagcaatcgcgcatcgcccaactggaacagagcctggagcgcctggccgagcgccagcgc
cgcctgaacgaagaattgcagcagctggcggccgatccggaagatgccgccattctcgaa
ttgaacgaacagctcgctgccggtgagttggagcaggaagcgctgcaacaggtcgaagag
cagcaggccgagcgcctgcagcaactgcgcgaggaactgcagcaggctggccaggcccag
cagcaggcgcaaggtgagctgcagcgcctcaacggccgcctggcgtcgctggaggcgctg
caacaggcggcgctcgatccagggcagggcgctggcgagtggttgcgcgagcagaacctg
ctgcagcgtccgcgcctggccgaagggctgcgcgtggaggccggctgggagctggcggtt
gagactgtccttggtgccgacctgcaggccgtgctgctggacgattttgccgggctggac
ttctccagtctggagcagggcgaactgcgcttggccagcccggcttcgggcggtgcgcgg
cgtgccggcagcctgatggacaagatcgagtcgagccacgacctgtcgtcctggctagcc
ggtgtgcgcccggtggaatcactggagcaggcgctggccgcccgtgtgcaactggcggac
ggcgaaagcctgatcagccgcgacggctactgggtcggccggcattttctgcgcgtgcgt
cgtgctgccgaagctgatagcggcgtgctggcgcgcggtcaggagctggaacgcctgcag
ctggagcgcgaggagcgcgaagcggccctggcgcagctggacgagcgtctgctgacgctg
agcgacgagcaacgtcttcaggaagaactgcgcgagcagcagcgccgtcagggccaggaa
ctggcgcggcagttggccgagctgaaggcgcgtctatccgccagccaggccaaggccgag
caattgggcctgcgtcgccgccgtctgcaggacgagctgcaggaggcggccgagcagcgc
gagatcgagcaggagcaactgggcgagtcgcgtctgcagttgcaggatgcgctggatgcc
atggccctggataacgagcagcgcgaaagcctgctggccagccgcgacagtctgcgcgag
cgcctcgaccgtgtgcgtcaggacgcgcgtcagcacaaggaccatgcccatcaactggcg
gtgcgcgtcggctcgctcaaggcgcagcacgactccacccgccaggcgctggagcgtctg
gagatgcaggtcgagcgcctgcatgagcggcgcgagcagttgtcgctgaatctggaagag
ggcgaggcgccgctggaagagctgcgcatcaagctcgaggaattgctcgagcggcgcatg
gcggtggacgacgaactgcgtcaggcgcgtttggcgctggaggacgccgatcgcgaactg
cgcgatgcggagaagcgccgcacccaggctgaacaacaggcgcaactgctacgcagccag
ctggagcaacagcgcatggattggcagtcgctcaacgtgcggcgcaaggcattggccgac
cagctcgccgaggacaactacgacctgcacggggtgatcgccacgctgccggccgaagcc
agcgagagcgcctgggaagaagagctggagcgcatggccgcacgcatcgcccgtctaggg
ccgatcaacctggcggccatcgacgagtatcagcagcagtccgaacgcaaacgttatctg
gatgcgcaggacgccgatctggtcgaagcgttggaaaccctggagaacgtcatccgcaag
atcgacaaggaaacgcgcaatcgtttcaaggacaccttcgatcagatcaatggcggtttg
caggcactctttccaaaagttttcggtggcggcaacgcttatttggaactcaccggcgaa
gatctactcgataccggtgtgaccatcatggcgcggcccccgggcaagaagaacagcacc
attcatttgctctccggtggagagaaagcattgactgctttggcactggtgttttccatc
ttccagctcaatccggcgccgttctgcatgttggacgaagtggatgcaccgctggacgat
gccaacgtcgggcgctacgcgcgactggtcaaggagatgtcagccacggtgcagttcatc
tacatcacccacaacaagatcgccatggaaatggccgatcagttgatgggggtcaccatg
cacgagccgggttgctcgcgtctggtggcggtggatgtcgaggaggcgctggcgatggtg
gaggcgtga
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integrated database retrieval system