Pseudomonas sp. LPH1: BHQ29_09385
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Entry
BHQ29_09385 CDS
T10175
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pslp Pseudomonas sp. LPH1
Pathway
pslp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BHQ29_09385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pslp03400
]
BHQ29_09385
Enzymes [BR:
pslp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BHQ29_09385
DNA repair and recombination proteins [BR:
pslp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BHQ29_09385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
TraI_hel_assoc_N
SLFN-g3_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
DEAD
NTPase_1
ATPase
AAA_29
PhoH
AAA_7
T2SSE
AAA_25
AAA_5
TrwB_AAD_bind
NACHT
LTM
GvpD_P-loop
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AQZ33474
LinkDB
All DBs
Position
2070744..2072774
Genome browser
AA seq
676 aa
AA seq
DB search
MSTMLAPALHDRAELFALLSIWSERGWLRELDRALAQLFAELDPQASPLLLLGAALASHQ
LGQGHVCLDLAATLANPDFTLSLPPEGEDAQEAMILPSQVLAGLSLESWLAACAGSALLE
SEGAPLVLSGACLYLRRYWNYERQVAGDIARRLQASAAAPTDLAVRLASLFPDALVVDGQ
RLTDWQKLACAMAAQGRFTLITGGPGTGKTTTVVRLLALLQEAAMATGEPLRLSLAAPTG
KAAARLTESIGAQVQTLALDERVREQIPTLVTTLHRLLGSRPGSRHFRHDAANPLPLDVL
VVDEASMIDLEMMASLLGALPAHTRLILLGDKDQLASVEAGAVLGDLCREAESGGYSEAT
RAWLESQTGERLEDPALVPGDKALAQHIVMLRHSRRFGSGSGIGRLARAVNLGDAQSARA
TLATGAHDLYVLRLSGEQDRALERLLIEGQGGGELRPQGYAHYLQVMLAERPAPDADSQA
WDRWAGRVLAAFDQFQLLCAVRKGTWGVEALNERIAEALVKRGLLEQSQGWYEGRPVLVT
RNDYSLGLMNGDIGIALRLPEPPESPGAPVREVLRVVFPRNDGSGALRHILPSRLSAVDT
VFAMTVHKSQGSEFAHCALILPDSLNPVLTKELVYTGITRARHWFSLVESRAGIFEQAVQ
RRVARRSGLREALEKQ
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgatgctggcgccggcgctgcatgatcgcgccgaactctttgccctgctttct
atatggagcgagcgtggctggctgcgcgagctggatcgggcgctggcgcagttgttcgcc
gaactggatccgcaggcttcaccgctgctcctgctcggcgccgcgctggccagtcaccag
ctgggtcaggggcatgtctgcctggatctggcggctacgctggccaatccggatttcacc
ctgtctctgccaccggaaggcgaggatgcgcaagaagcgatgatcctgccgtcgcaggtg
ctggccgggcttagcctggagtcctggctggcagcctgtgccggcagcgcgctgctggag
tccgagggggcgccgttggtgctcagcggcgcctgtctatatctgaggcgttactggaac
tacgagcgccaggtggctggcgatatcgcccggcgtctgcaggcgagcgccgcggcgccg
accgatctggctgtgcgcctggcttcactctttcctgatgcgctggtggtggacggccag
cgcctcaccgactggcagaaactggcttgtgctatggcggcgcaagggcgctttaccctg
attaccggtgggccgggaaccggtaagacaaccacagtggtgcgcctgctggcgctgttg
caggaggcggccatggccactggcgagccgctgcgcctgagtctggcggcgcccaccggc
aaagcggccgcgcggctgaccgaatccatcggcgcgcaggtgcagaccctggcgctggat
gagcgagtgcgggagcagattccaaccctggtgacgacgctgcatcgcctgctgggcagt
cgtcctggcagccgtcatttccgtcacgatgccgccaaccccttgccactggatgtgctg
gtggtcgacgaagcctcgatgatcgacctggaaatgatggccagcctgctgggcgcgttg
ccggcgcatacgcgtctgattctgctgggcgacaaggaccaactggcgtcggtggaggcc
ggtgcggtactgggggacctgtgccgagaggcggagagcggtggctacagcgaggcgacg
cgtgcctggctggaaagccagacgggcgaacggctggaagatccggcgttggtgcccggt
gacaaggctctggcgcagcatatcgtcatgctgcgtcactcgcgtcgtttcggcagtggt
tcgggtatcgggcgtctggcgcgtgcggtgaacctgggcgatgcgcagtcggcccgcgcg
actctggcaaccggtgcacatgatttgtacgtgttgcgtttgtcaggtgagcaggatcgt
gcgctggagcgactattaatagaggggcagggcggcggcgagcttcgtccgcaggggtat
gcgcattatctgcaggtgatgctggcggagcgtcctgctccagatgccgactcccaggcc
tgggatcgttgggccggtcgcgtcctggcagcgttcgatcagttccagttgctctgtgcg
gttcgtaaaggtacatggggcgtggaagcgctcaacgaacgtattgccgaagcgctggta
aagcggggcctgcttgagcagtcgcaaggctggtatgaaggtcggcccgtgctggtaacg
cgcaacgactacagcctggggctgatgaacggcgatatcggcatcgcgctgcgtctgccg
gagccgccggagtctccaggcgcacctgtgcgcgaggtgttacgagtggtattcccgcgc
aacgacggcagcggcgccttgcgacatatcctgcccagccgtctgagtgcggtggacacc
gtgttcgccatgaccgtgcacaagtcgcagggctcggagttcgcccattgcgcgctgatc
ctgcctgacagcctcaatccggtgttgaccaaggagctggtctacaccggcataacacgg
gctcgtcactggttcagcctggtcgaaagccgagcgggcatcttcgagcaggctgtgcag
cggcgcgtggcgagacgcagtggcctgcgcgaggcgctggaaaagcaataa
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