Pseudomonas sp. LPH1: BHQ29_11825
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Entry
BHQ29_11825 CDS
T10175
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pslp Pseudomonas sp. LPH1
Pathway
pslp00061
Fatty acid biosynthesis
pslp00071
Fatty acid degradation
pslp01100
Metabolic pathways
pslp01212
Fatty acid metabolism
pslp02024
Quorum sensing
pslp04146
Peroxisome
Module
pslp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BHQ29_11825
00071 Fatty acid degradation
BHQ29_11825
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BHQ29_11825
09145 Cellular community - prokaryotes
02024 Quorum sensing
BHQ29_11825
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pslp01004
]
BHQ29_11825
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pslp04147
]
BHQ29_11825
Enzymes [BR:
pslp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BHQ29_11825
Lipid biosynthesis proteins [BR:
pslp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BHQ29_11825
Exosome [BR:
pslp04147
]
Exosomal proteins
Exosomal proteins of breast milk
BHQ29_11825
Exosomal proteins of breast cancer cells
BHQ29_11825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AQZ33909
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All DBs
Position
complement(2620924..2622630)
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AA seq
568 aa
AA seq
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MVDSYKNNKGGSPVADAIRLPLELFYEREARHPNKRYMVQPLGGGQLLELSWADVGEQAR
RAASWLRSRELPQGSRIAIISKNCAHWIVADLAIWMAGHVSVPLYPNLTADSMGQVLEHS
EAALAFVGKLDDWASMAPGLPPGLPTVSLPLHPQGSFDYSWDDLQRSAPIQDDPKPAANQ
LATIIYTSGTTGTPKGVMHNFSNFGFAASNAIKLFGVGEDDRLISYLPLCHVAERMFVEL
ASIYAGQTIFFAESLDTFLEDLKRARPTVMFGVPRIWTKFQMGVYSKMPAQKLDRLLRLP
IIGRFIGRKVLAGLGLDAIRYALSGAAPVPEALLNWYRRLGMEIQEVYGMTENCGYSHVC
LPGKFKQGWIGQNNPGVEVRIGEDGEVLVRSGATMQGYYKDPIKTAETLTDDGFLRTGDK
GEQDAEGNLRLTGRIKEIFKTSKGKYVAPAPIENRIGEHSRIEQVCVVGDGLPQPIALCV
LSDVGRQEAANDSRDELENSLKALLAEVNGRLDHHERLQGLVLVKEVWAVENGFLTPTLK
IKRAVIEGTYGERFAEWQQRSEAVLWHD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgattcctacaaaaacaacaaaggaggaagccctgtggctgatgcaatccgtttg
ccgctcgagctgttttacgaacgtgaagcaaggcacccgaacaaacgctacatggtgcaa
cctctagggggcggccagctgctggagctgagctgggccgacgtgggcgagcaggcgcgc
cgcgcagccagctggttgcgtagccgtgaactgccgcagggcagccgcatcgccatcatc
tccaagaactgcgcgcactggatcgttgccgatctggcgatctggatggcgggccacgtt
tcggtaccgctgtatcccaacctcaccgccgactccatggggcaggtgctggagcattcc
gaagcagccctggcctttgtcggcaagctcgatgactgggcctcgatggcaccgggcctg
ccgccgggcttgccgaccgtcagcctgccgctgcatccgcagggcagcttcgactacagc
tgggatgacctgcagcgcagcgcgccgattcaggatgatcccaagccggcagccaaccag
ttggccaccatcatctacacctccggcactaccggcacgcccaagggcgtgatgcacaac
ttctccaatttcggtttcgccgccagcaacgccatcaagctgtttggcgtgggcgaggat
gatcgactgatctcctacctgccgctgtgccacgtggccgagcgcatgttcgtcgagcta
gcttccatctatgccgggcagacgatcttcttcgccgagagcctggataccttcctggaa
gacctcaagcgtgcgcggccgaccgtgatgttcggcgtgccgcgcatctggaccaagttc
cagatgggcgtgtacagcaagatgccggcgcagaagctcgaccgcctgctgcggctgccg
atcatcggccgcttcatcggtcgcaaggtactcgccggcctcggcctggacgccattcgc
tatgcgctgtccggcgccgcgccggtgcccgaggcgctgctcaactggtatcgccgcctg
ggcatggagatccaggaggtctatggcatgaccgagaactgtggttattcgcacgtgtgt
ctgccgggcaagttcaagcagggctggatcggccagaacaacccgggcgtcgaggtgcgc
atcggcgaggatggcgaagtcctggtgcgcagcggcgcgaccatgcagggttactacaag
gacccgatcaagaccgccgagacgctgactgacgatggcttcctgcgcactggcgacaag
ggcgagcaggacgccgaaggcaacctgcgccttaccggccgcatcaaggaaatcttcaag
accagcaagggcaagtatgtcgcgcctgctccgatcgaaaaccgcatcggcgagcactcg
cgtatcgagcaggtgtgcgtggtcggcgacggcctgccgcagcccatagccctgtgtgtg
ctatccgatgtggggcgtcaggaagcggccaatgacagtcgcgatgagctggagaacagc
ctcaaggccctgctcgccgaggtcaatggtcgtctcgatcaccatgagcggctgcaaggc
ctggtactggtcaaggaggtctgggcggtggagaacggtttcctgacgccgactctgaaa
atcaaacgcgcggtgatcgagggcacttatggcgagcgtttcgccgagtggcaacagcgc
agcgaagccgtgctctggcacgattga
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