Pseudomonas sp. LPH1: BHQ29_13145
Help
Entry
BHQ29_13145 CDS
T10175
Name
(GenBank) hypothetical protein
Organism
pslp Pseudomonas sp. LPH1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5801
VWA_2
VWA
DUF4114
HemolysinCabind
Peptidase_M10_C
Big_9
Motif
Other DBs
NCBI-ProteinID:
AQZ34139
LinkDB
All DBs
Position
complement(2900058..2908682)
Genome browser
AA seq
2874 aa
AA seq
DB search
MATLIGVVSQVVGEVFAVASDGSRRPISEGDRVYAGEQLVTGASGAVAIAMTNGQQLTLG
RDSSMTLDAQMLAYRGESQPPVAETPPATPSDADLTDVERLQAAIEAGVDPTLEGEATAA
GPGAGAGGAGGVGGGHSFVLLDEVGGALDPVIGFPTEGLPGGPEFPEGEPIAADDAVPAV
DGIPTGGTASNAVDEDGLPDGIVGGVNDLDGEATLVTGVLGYSFGPDGPGTFTWSTAGLA
DLGISSGGVPLTYQVSADGLLLTAFAGETVVFEVQVTDLLTGAYQFELFAPLDHAAPPLG
ESDENDILYLFNYTITDGNGTPASGSLSILIDDDSPELVEGERPVVGGLVHEDALASIGN
AEPGNLPAQTHQLIGDPGALDALVNFGADGRGGFQLSTNPEALSDLQALALTSGKEPLVY
SVEVSDDGSTSTLTATAGGVPVFTLVVTSDGGYVFTLSGPIDHPRKDGDDSELLGDKDLA
LDFSKLLIATDYDGDAVPGGFNPGSFVIDVEDDVPVLVEDGVKHCLTITYKGGDASYLNS
YGYYIKGPDGEPISGQIIWGDTSGLAEGDSITLHGLDPSQVGFFIIPNGGLNGAASNTEV
TFQIVEGQWKAFIGDTPIDGAGGAHVLFSDPTLNPGGKSHVDDNTAPGNQNWEDVNDGNS
DNDYNDVNIQVAWTTKAPVGGTVHEDQLDSPYPGNPEAGQRLVISTDGGAGSLMALVSFG
ADGPGAFGLVGSETVAEVLGAQGLTSGGEPLVYNVSTTTDPDGNLISTLTATAAADVGGY
PVFTLVINADGSFHFELQGPIDHPRGDGDDNELWSSEGGIGLDFTHLFTATDGDGDPLQL
PEGAKGLFVINIQDDVPLPAQPNPQQPVVGGLVHEDALGNGNAEPGSEPEQTLTVEGGIG
TLDALVNFGADGRGGFHLSQEPSALSGLQALGLSSGGVALFYVVSTDGTTLTATAGEGGS
EVFRLEVNSDGSYLFTLKGALDHKEADGIDSETLGDNSLALDFSGVLIATDRDGDPITDG
FASGSFVIDVEDDVPILAGAPGGRPTVGGLVHEDALDNGNAEGGQTLTVEGGPGTLDALV
HFGADGRGGFHLSKELGALADLEALGLTSGGVPVTYSVSDDGTTLEAMAGTTQIFILEVN
LDGSYLFTLKGPIDHPEGDGNDSETLGDSSLALDFSGVLVATDGDGDPLADGFDAGSFVI
DIEDDVPTLNEPNPQLPAVGGTVHEDLLSDPHTGNPDGALQALVISTATGGGSLTALVSF
GADGPGEFSLVNAETAESLLWAQGLTSGGEPLEYVVTKECDGSGNLLSTTLKATAAGGYP
VFELVVKVNGDFSFELQGPIDHPVQDGNDDELWSSEGGIGIDFTQLITATDGDGDPLDMP
LDAAGLFVINVQDDVPELVDGGSSHCLTLTYKGGDAGYLNSYGYYIKGPDGTPVSGVLVW
GNTTAMQIGDSITLQGLDPASVGFFIIPNGASNDVPDGTAITFQWIDGQWQAVADGQPLT
GSGGADVLFDNPALNPAGKSHVQDNDAPGNQNWEDINSASASDNDYNDVNIQATWTVKTP
APVGGTVHEDKLTDPHQGNPDGPGQTLVISTATGAASLLSLVAFGADGPGNFSLVEEGSA
AELLDAQGLTSGGEPLDYKVTQELDDDGNLVSTTLTATATVADGYPVFTLVVEANGDFTF
TLQGPIDHPLKNGDDNELWSSDGAFGIDFTQLLAITDGDGDPLQIPQGVGGLFVINVQDD
VPTLAEKDCGCDPKNIDHGISHVLFLVDTDDGTKVVKIEYPGGSDIKDPSHPQGYVAWVE
QAYGGTVEAYYIKAGTKFYDGDGDVINPVDLGLGNYLVGGNSAFGGSKVTVAKHPQYQAV
DENCAPTFNHLVHEDQLDSPYLGNPEAGQTLVAEGGAGTLHALVNFGADGPGNFSLTGDV
ASMLAQQLSSGGVELSYRVEYEWDGDQLVNSTLIGEVAGVDGYPVFSFEVGADGSYRFEL
KGPLDHPLGDGNDGETLGTAGQPIDFSKMLQATDGDGDPLPAGFPAGTLVIDVQDDVPIA
ASDKPDCIVQAAPPLVNLTLVLDISLSMAGAKLAALKQAVIDLAQGYAGLSAPVHVNLIT
FNSSAAEIGDFTFSSVGDPGYTALLTAVNGLSASGFTNYEQALSAAKTQITSDIMAPGAD
PAQQHKLYFISDGEPTVGAQGATLTTWIANNWTNFIGDIDEDGDSATNNFTAHSVGINFT
GSFMGQIASDGSVINSAPGSLSATLLDLADLGGSVSGDVLANDSLGADGLGRIESVSVDG
QTFSLNDAGNGIEASGAGSTTWSFNAATAELTLNTATGTLKIHLDGDNVGQFDFAAKGNL
SFGPSGQLTQSFTYVVSDGDGDRASADLDICIRGDQSVLVVGSNADDTPNSSVPHHVPSQ
YDDGKGAIEGTFGNDVLIGDLGGAKPPVVKPAENYNIALILDRSGSMADNPDGPGGYSSR
LALLKDAVNAFIGKLGTHTGQINIALISFSSSSSLLLSGTLAQIQSALAAPNNVLMALTA
SGATNYEAAMQQANAWFGGVEANGYNNLAYFLTDGDPTTYNGDNSNSGSTVNYRDVNRAL
DDAATLMARADVHAIGIGTGVNSNVLRFFDNTDVTGQGSLSFGGNTVNGAVGEPQIVTTP
SELFAVLDPGSVTDGGYASLGDDHLVAGAGDDYLFGDSLNTLWIDADKAPGYQVLVDHLT
TTLGAAPTQSQIMDFIQLHAEQLGASVPGVGGNDRLEGGAGNDWLFGQGGDDILIGGTGN
DVLVGGSGNDTFVWNAGDRGGNYHDIVKDFGNGADKLDLSQLLVGVSDPASADVLTQYLS
FDFVSDPGSTVINIASAGGGAPVDQTITLENTILSGGNTADIIQGMLDQNQLVA
NT seq
8625 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttattggtgtcgtcagtcaggtcgtcggcgaagtgttcgcggtagcgagc
gacggatcgcgccggccgatcagtgaaggagaccgggtctacgcgggcgagcaactggta
accggcgcctcgggcgcggtggccattgccatgaccaacggccagcaactgacgctcggg
cgcgacagcagcatgacgctcgacgcgcagatgcttgcctatcgcggcgaatcgcagccc
ccggtcgctgaaacacctcccgccacccccagcgatgccgacctcaccgatgtcgagcgc
ttgcaggccgccatcgaagccggtgtcgacccgactctggagggcgaagctactgctgct
gggccgggtgctggcgctggcggagcaggtggcgtggggggcgggcattccttcgtgctg
ctcgatgaggtcggtggggcgctggatccggtgatcggttttcccactgaaggcctaccc
ggtggaccggagtttccggagggtgaacccattgctgctgacgatgccgttcctgcggta
gatggtattcccacgggtggcacagcctccaatgcggtggacgaggatggcctgcctgac
ggcatcgttggcggagtgaacgatctggatggcgaggcgacgctggtcaccggggttctg
ggctacagcttcgggcccgacggtccgggtaccttcacctggtcgactgccggtctggcg
gatctgggtatctcttcgggtggtgtgccgctgacctatcaggtcagcgccgacggcctt
ctcctgaccgcttttgccggcgagacggtggtgttcgaggtgcaggtcaccgacctgctg
accggggcttatcagttcgagctcttcgctccgctggaccatgccgcgccgcccttgggt
gaaagcgacgagaacgacatcctctatctgttcaactacaccatcaccgacggtaacggc
accccggcaagcggcagcttgagcattctgatcgacgacgacagtcctgaattggtcgag
ggtgagcgtccggtcgtcggaggtctggtgcatgaggatgccctggctagtatcggcaac
gccgagccgggcaacctgcctgcgcaaacccatcagctgattggcgatccgggggcactg
gatgcgctggtcaacttcggggctgacgggcgcggtggcttccagctgagtaccaaccct
gaggcattgagcgatctgcaggcattggccctgacgtcgggtaaggagccgttggtctat
tccgtcgaggtctcggacgacggcagcacgagcaccctgacagcgacagcgggaggtgtg
ccggtattcacgctggtggtgaccagcgatggtgggtatgtcttcaccttgtcggggccg
atcgatcatccacgcaaggatggagatgacagcgagctgctgggcgacaaggatctcgcg
ctggacttctccaagttgctgatcgccaccgactacgatggtgacgcggtgccaggcggc
ttcaaccctggcagcttcgtgatcgacgtggaagatgatgtgcccgtgttggtggaagac
ggagtcaaacactgcctgaccatcacgtataagggcggtgatgcctcatacctcaacagc
tacggctattacatcaaaggcccggatggtgagccgattagcggtcagatcatatggggc
gacaccagcggcctggctgagggagactcgatcacccttcatggcctcgacccgagccag
gttggtttcttcatcattcccaatgggggcttgaacggcgccgccagcaacaccgaggta
accttccagatcgtggagggacagtggaaggccttcatcggcgatacacccatcgatggg
gccggtggcgctcacgttctgttcagtgacccgacgctgaatcccggcggcaagtcccat
gttgacgacaataccgcgccgggcaaccagaactgggaggatgtcaacgacggcaacagt
gacaacgactacaacgacgtaaacatccaggtggcatggaccaccaaggcgcccgtcggc
ggcaccgtgcacgaagaccaactggactcgccttatcccggtaatcctgaagctggtcag
cgcctggtgatcagcacggacggtggcgctggtagtttgatggcgctggtgtccttcggg
gctgacggcccgggtgcattcggcctggtaggcagcgaaacggtggcagaggtcctaggt
gcccagggcctgacttctggcggggagccgctggtctacaacgtcagcacgaccacggat
cctgacggcaacctgattagcacattaaccgcgacggctgccgcagacgttggtggctat
ccggtattcaccctggtgatcaacgccgatggcagtttccacttcgaactgcaaggaccc
atcgatcatccccgcggcgatggtgacgataacgagctgtggtcgtccgaaggtggcatt
ggtctcgacttcactcacctgttcaccgctaccgatggcgacggcgatccgctgcagctg
cccgaaggcgcgaaaggcctgttcgtcatcaatattcaggatgacgtaccgttgccggcc
cagcccaatccgcagcagccggtggtcggcgggttggtgcatgaagatgccctgggtaac
ggcaatgccgagcccggcagcgagcctgaacagaccctcacggttgagggcggtatcggc
acattggatgcactggtcaacttcggcgccgatggtcgtggtggtttccacctgagccag
gagcccagtgcgctgtctggactgcaggcacttggcttgagctccggcggtgttgcgctg
ttctatgtcgtatctacagacggcactacgctcaccgcgacagctggtgaaggtggcagc
gaggtcttccgcctcgaggtgaatagcgatggcagctacctgttcacgctcaagggcgcg
ttggatcacaaggaggcggacggtatcgactccgaaacccttggcgacaacagcctggcg
ctggatttttctggcgtactgatcgccactgatcgtgatggtgatccgatcaccgatggt
tttgccagcggtagcttcgtcatcgacgttgaggatgatgtgccgatacttgctggggcg
ccgggtgggcggccaacagtgggcggccttgtgcatgaggatgcgctggacaacggcaat
gccgagggcggtcagaccctgaccgtcgagggtggcccaggcaccctggatgcactggtg
cattttggggccgatggccgtggcggctttcacctgagtaaagagcttggagcgctggcg
gatctggaggcgctgggcctgacatcgggcggcgtgcccgtgacttacagcgtatcggat
gacggcaccaccttggaggcgatggcgggaactactcagatcttcatcctggaggtcaac
ctggacggcagctacctgttcaccttgaaaggtccgattgaccacccggaaggtgatggt
aacgactcggaaaccctgggtgacagcagcctggctctggatttctccggtgtgctggtg
gccaccgacggtgacggtgacccgctggctgatggtttcgatgccggcagtttcgtgatc
gatattgaagacgatgtgccgacgctcaacgaacccaatccgcagctacctgctgtgggt
ggcaccgtgcacgaagacctgctgagcgacccgcatacgggtaaccccgacggtgcgttg
caggcactggtgatcagtactgccactggtggtggaagcctcaccgcacttgtgtcgttc
ggcgccgatggtcccggtgagttcagcctggtgaatgccgagacggcagagagcctgctg
tgggcgcaaggcctcacctccggcggtgaacccctggaatacgtggtgaccaaagagtgc
gatggcagtggcaatctgctcagcaccacgctcaaggccactgctgcaggaggctatccg
gtatttgagctggtggtgaaggtcaacggcgacttcagcttcgaactgcaggggcccatc
gatcatccggttcaggatggtaacgacgatgaattgtggtcgtcggaaggcgggattggc
atcgatttcacccagctgattaccgccaccgacggcgatggtgacccgttggatatgccg
ctcgatgctgccggactgttcgtcatcaacgtacaggacgatgtgcctgagctggtggat
ggtggttccagtcactgtctgacccttacctacaagggcggtgatgccggctacctcaac
agctacggctactacatcaaggggcctgatggcacaccggtcagtggcgtgctggtctgg
ggtaataccaccgccatgcagatcggtgattccatcacgctacaagggcttgatcccgcg
tcagtgggcttcttcatcatccccaatggtgcctcgaacgatgtacctgacggcactgcg
ataacgttccagtggatcgatgggcagtggcaagctgtggctgatggtcagccgcttacc
ggcagtggcggcgctgatgtgctgttcgacaacccggcgctcaaccccgcaggcaagagc
catgtgcaagacaacgatgctcccggaaaccagaactgggaggatatcaacagcgccagc
gccagcgataacgactacaacgatgtcaatatccaggccacctggacggtgaagacgcct
gcaccggtgggcggtacggtacatgaggacaagctgaccgatccccatcagggcaacccg
gatggccctggccagacgttggtgatcagcactgcgacgggcgcggccagtttgctctcg
ctggttgccttcggcgccgacgggcccggtaacttcagcctggtggaggagggtagcgca
gccgagttgctggacgcccaggggctgacttctggcggtgaaccgctcgactacaaggtc
acccaggagcttgatgacgacggtaatctggtcagcaccacgctcactgcgacggccacg
gttgcagacggttatccggtattcaccctagtggtggaggccaacggtgatttcaccttc
actctgcaggggccaatcgaccatccgctgaaaaatggtgacgacaacgagctctggtcg
tcggacggtgcctttggcatcgacttcacccagttgctggcgatcaccgatggcgatggc
gacccgctgcagataccgcagggggttggcggtctgttcgtcatcaacgtgcaggacgac
gtgccaacactggccgagaaggactgcggctgcgatcccaagaacatcgatcatggcatt
tcccatgtgctgttcctggtcgacaccgacgacggcaccaaggtggtcaagatcgaatat
cccggcggtagtgacatcaaggatccgagccacccgcaaggctacgtcgcctgggtcgaa
caggcctatggcggcaccgtcgaggcctactacatcaaggccggtaccaagttctacgac
ggcgatggtgacgtcatcaatcccgtcgatctaggcctgggcaactacctggttggaggc
aacagcgccttcggtggatccaaggtgactgttgccaagcacccgcagtatcaggccgtg
gacgagaactgcgcgcctactttcaatcacctggtgcacgaggatcagctcgactcgccc
tatctgggtaaccccgaggctggccagacactggtggccgaaggtggtgctggcacgttg
catgcgctggtcaatttcggcgccgatgggccggggaactttagtctgaccggtgatgtg
gcctcgatgctggcgcagcagctcagctccggtggcgtcgaactgagctaccgcgtcgag
tacgaatgggatggcgaccagctggtcaattccaccctgatcggtgaggtggcgggcgtc
gacggctatccggtattcagcttcgaggtgggggctgacggcagttatcgcttcgagcta
aaaggcccgctggatcatccgttgggcgatggtaacgatggtgaaaccctgggtacggca
ggacagcctatcgatttctccaagatgctgcaggcgaccgatggtgatggcgacccgtta
cccgccggcttcccggcagggacgttggtgatcgacgtgcaggatgacgtgcccattgcc
gccagcgacaagcccgactgcatcgtccaggccgcgccgccgctggtgaacctgaccctg
gtgctggatatctcgttgagcatggccggggccaagctggcagcgctcaagcaggcagtg
atcgacctggcccagggctatgccggtctctctgctccggtgcacgtcaacctgatcacc
ttcaactcgagcgccgcagaaatcggcgacttcaccttcagctcggtgggtgatccgggc
tacacggctctgctcacggcggtcaacggtcttagcgccagtggtttcaccaactacgag
caggccctgagcgcggccaagacgcaaatcaccagcgacatcatggctccgggcgccgat
ccggcgcagcaacacaagctgtacttcatctccgatggtgagcctaccgtcggagcgcag
ggcgcgacgctgaccacctggatcgccaacaactggacgaacttcatcggcgacatcgat
gaggatggcgacagcgccaccaacaacttcacggcgcactccgtgggcatcaacttcacg
ggctccttcatggggcagatcgccagtgatggttcggtgatcaacagcgcgcctggcagc
ctgtccgcaaccctgctggacctggccgacctgggcggcagtgtctccggcgacgttctg
gccaatgacagcctgggcgccgacggtctcgggcgtatcgagtcggtcagcgtcgatggc
cagactttcagcctcaacgacgccggcaacggcattgaggcgagcggagcaggttcgacg
acctggagcttcaatgctgcaacggccgagctgaccctcaacaccgcaaccgggacgttg
aagattcacctggatggcgacaatgtcgggcagttcgactttgccgcgaagggcaatctg
agcttcggccccagcgggcagttgacgcagagctttacctacgtggtgagcgacggcgat
ggcgaccgtgcctcggccgatctggatatctgcatccgtggcgaccagtcggtactggtg
gtcggcagcaatgccgacgacacgccgaactccagcgtgcctcaccatgtgcccagccaa
tacgacgatggcaagggggctatcgaagggactttcggcaatgacgttctgatcggtgat
ctgggtggcgccaagccgccggtggtcaaaccggcggagaactacaacattgccttgatc
ctcgatcgttccggcagtatggcggacaatccggatggcccgggggggtacagcagccgc
ctggcgttgctcaaggatgcggttaatgccttcatcggcaagctgggcacccataccggg
cagatcaacattgcgctgatctccttctcgtccagctccagcctgttgctcagcggtacg
ctggcgcagatccagtcggccttggcagcgcctaacaacgtgctgatggcgctgactgcc
tctggcgccactaactacgaggcggcgatgcagcaggccaatgcctggttcggtggggtg
gaggccaacggctacaacaatctcgcctacttccttaccgatggtgacccgaccacctac
aacggcgacaacagcaacagcggcagcacggtgaactaccgcgacgtcaatcgcgcgctg
gatgatgccgcgacgctgatggcccgcgccgatgtgcatgccattggcatcggtaccggg
gtcaacagcaacgtgctgcgtttcttcgacaataccgatgtcacagggcaagggtcgctg
tcctttggtggtaacaccgttaatggtgcggtaggcgagccgcagatcgtcaccacgccg
agtgagctcttcgcggtgctcgatcccggcagcgtcaccgatggtggctacgcgagcctg
ggtgacgatcatctggtggccggtgcaggtgacgactacctgttcggtgactcgctcaat
accctatggatagacgctgacaaggcacctggttatcaggtgctggtcgatcacctgacg
accaccttgggcgcagctccgacccagtcgcagatcatggactttatccaactgcacgct
gagcaactgggggcatcggtaccgggtgtcggaggaaatgacaggctcgaaggtggtgcc
ggcaacgactggctgttcggccagggtggcgatgacatcctgatcggtggcaccggcaac
gatgtactggttggcggcagcggcaacgataccttcgtctggaatgcgggagatcgcgga
ggcaactaccacgatatcgtcaaggacttcggtaatggcgcggacaagctggatctatcg
cagcttttggtgggtgtcagcgatccagccagtgccgacgtattgacccaatacctgagc
ttcgacttcgtcagcgatccgggtagtacggtgatcaacatcgccagcgccggaggtggc
gcgccggtggatcagaccatcaccctggagaacaccatcctctccggtggcaatactgca
gatatcatccagggcatgctggaccagaatcagttggtcgcctga
DBGET
integrated database retrieval system
