Pseudomonas sp. LPH1: BHQ29_13630
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Entry
BHQ29_13630 CDS
T10175
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pslp Pseudomonas sp. LPH1
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pslp03009
]
BHQ29_13630 (rimO)
Enzymes [BR:
pslp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BHQ29_13630 (rimO)
Ribosome biogenesis [BR:
pslp03009
]
Prokaryotic type
ribosomal protein modification factors
BHQ29_13630 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AQZ34225
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Position
3024306..3025628
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEALAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKTE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEAVPDDVKQDRW
ERFMAHQQAISSARLQAKIGLEMDVLIDEVDSEGAVARSWADAPEIDGSVFIDSPNVKPG
DKVRVRIVDADEYDMWGELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccacacctaaagtagggtttgtctcccttggctgtccaaaagcgacggtc
gactccgagcgaatcctgacccaactgcgcatggaaggttacgagatcgttccgacctac
caggatgccgacgtggtggtggtcaacacctgtggtttcatcgacagtgccaaggcagaa
tcgctggacgccatcggtgaagcgctggcggaaaacggcaaggtgatcgtcaccggttgc
atgggcgtggccgaagacagcatccgcgacgtgcacccgagcgtgctggcggtgaccggt
ccgcagcagtacgagcaagtggtcaacgccgtacacgaagtcatcccgccgaagaccgag
cacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgaccccgcgccactat
gcgtacctgaagatttctgaaggctgcaaccatacctgcagcttctgcatcatcccgtcc
atgcgcggcaagctggtcagccgcccggtgggcgatgtgctcagcgaagccgagcgcctg
gtcaaagctggcgtgaaagagctgctggtgatcagccaggacaccagcgcctacggcgtc
gacctgaagtacaagctggacttctggaacggccagccggtgaagacgcgcatgctcgag
ttgtgcgaagcgctgtcgtcgatgggcgtgtgggtgcgtctgcactacgtctacccctac
cccaacgtcgatgatgtaatcccgctgatggccgccggcaagctgttgccgtacctggac
atccccttccagcacgccagcccgaaagtactcaagtcgatgaagcgcccggccttcgaa
gacaagaccctggcgcgcatcaagaagtggcgtgagatctgcccggagctgaccatccgc
tccaccttcatcgtcggtttcccaggcgagaccgaagaggacttccagtacctgctggac
tggctgaccgaagcgcagctcgaccgcgtcggttgcttccagtattcaccggtcgagggc
gcaccagccaacgacctgggcctggaagcagtgcctgacgacgtcaagcaggaccgttgg
gagcgcttcatggcgcaccagcaggccatcagctctgcacgtcttcaggccaagatcggc
ctggagatggacgtactgatcgacgaagtggacagcgaaggtgccgtggcccgctcctgg
gccgacgccccggagatcgacggcagcgtgttcatcgattcccccaacgtcaagccgggc
gacaaggtgcgcgtacgcatcgtcgatgccgacgagtacgacatgtggggcgagctggtc
tga
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