KEGG   Pseudomonas sp. LPH1: BHQ29_14955
Entry
BHQ29_14955       CDS       T10175                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pslp  Pseudomonas sp. LPH1
Pathway
pslp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pslp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    BHQ29_14955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pslp03019]
    BHQ29_14955
   03009 Ribosome biogenesis [BR:pslp03009]
    BHQ29_14955
   03036 Chromosome and associated proteins [BR:pslp03036]
    BHQ29_14955
Enzymes [BR:pslp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BHQ29_14955
Messenger RNA biogenesis [BR:pslp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BHQ29_14955
Ribosome biogenesis [BR:pslp03009]
 Eukaryotic type
  90S particles
   RNase
    BHQ29_14955
 Prokaryotic type
  rRNA processing factors
   BHQ29_14955
Chromosome and associated proteins [BR:pslp03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BHQ29_14955
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: AQZ36236
LinkDB
Position
complement(3296425..3297102)
AA seq 225 aa
MSRLERKLGYSFKDQDLMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQARE
GQLSRLRARLVKGETLAVLARGFELGEYLRLGSGELKSGGFRRESILADALEALIGAIYL
DAGMDAARERVLDWLTGELDGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDVQGEPHC
RTFMVECQVSLLNEKTLGQGGSRRIAEQVAAAAALIALGVENGND
NT seq 678 nt   +upstreamnt  +downstreamnt
ctgtcccgcctcgagcgcaagctcggctatagcttcaaggaccaggacctgatggtcctg
gccctgacccatcgcagtttcgccggccgcaataatgagcgtctggaatttctcggtgat
gccatcctcaatttcgtagccggtgaggcgctgttcgagcgcttcccgcaggcccgcgaa
ggccagctatcacgcctgcgtgctcgcctggtcaagggcgagacgctggccgtgctggcg
cgcggtttcgagctgggcgaatacctgcgcctgggctccggtgagttgaaaagcggcggg
ttccgtcgcgagtcgattctggccgacgccttggaggcgctgattggtgccatctatctg
gacgccggtatggatgcagcccgcgagcgcgtgctggactggctgaccggtgagctggac
ggcctgaccctggtcgacaccaacaaggatccgaaaacgcgactgcaggagttcctgcaa
tcgcgtgcctgcgagctgcctcgttatgaggtggtggacgttcagggtgagccgcattgc
cgtaccttcatggtcgagtgccaggtatccctgctcaatgaaaagaccctgggccagggc
ggcagccggcgtatcgccgagcaggtcgctgcggctgcggcgctgatcgccctcggggtg
gagaatggcaatgactga

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