Pseudomonas sp. LPH1: BHQ29_15620
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Entry
BHQ29_15620 CDS
T10175
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pslp Pseudomonas sp. LPH1
Pathway
pslp00260
Glycine, serine and threonine metabolism
pslp00460
Cyanoamino acid metabolism
pslp00630
Glyoxylate and dicarboxylate metabolism
pslp00670
One carbon pool by folate
pslp00680
Methane metabolism
pslp01100
Metabolic pathways
pslp01110
Biosynthesis of secondary metabolites
pslp01120
Microbial metabolism in diverse environments
pslp01200
Carbon metabolism
pslp01230
Biosynthesis of amino acids
pslp01240
Biosynthesis of cofactors
pslp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BHQ29_15620 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BHQ29_15620 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BHQ29_15620 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BHQ29_15620 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BHQ29_15620 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BHQ29_15620 (glyA)
Enzymes [BR:
pslp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BHQ29_15620 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AQZ34566
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Position
3433941..3435194
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AA seq
417 aa
AA seq
DB search
MFSKHDQLQGYDDALLAAIQAEEQRQEDHIELIASENYCSQRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLGAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDENGLIDYDEVERLAVEHKPKMIVAGFSAYSRV
LDFPRFRSIADKVGALLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLRGPRGGLIL
AKANEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEAMEPEFKAYQQQVIDNARAMAAV
FVERGYDVVSGGTDNHLMLISLVKQGLTGKAADAALGDAHITVNKNAVPNDPQSPFVTSG
IRIGTPAVTTRGFKEGECRTLAGWICDILDDLENPAVIERVRSQVADLCATYPVYAD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccaactgcaaggctacgacgacgccctgctcgcggcaatccag
gccgaagaacagcgccaggaagaccatatcgagctgatcgcctcggagaactactgcagc
cagcgcgtcatgcaggcgcaaggcagcggcctgaccaacaagtacgccgaaggttatccg
ggcaagcgttactacggcggttgcgagcatgtggacaaggtcgaggcgctggccatcgag
cgcgccaaacagctgttcggcgccgactacgccaacgtccagccgcattcgggctcttcc
gccaacagcgccgtgtacctcgcgctgctgggtgctggtgacaccatcctcggcatgagc
ctggcccatggcggccacctgactcacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacgagaacggcctgatcgattacgacgaggtcgagcgt
ctggcagtcgagcacaagccgaagatgatcgtcgccggcttctcggcatattcgcgtgta
ctggacttcccccgttttcgcagcatcgccgacaaggtcggtgcgctgctgttcgtcgac
atggcccacgtcgccggtctggttgcagccggcctgtacccgaacccggtgccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgtggcccgcgcggcggcctgatcctg
gccaaggccaacgaagagatcgagaagaagctcaactccgccgtattccccggtgcccag
ggcggcccgctgatgcacgtcatcgccgccaaggcggtgtgcttcaaggaagccatggag
cctgaattcaaggcctaccagcagcaggtcatcgacaacgcccgcgccatggcagcggtg
ttcgtcgagcgcggctatgacgtggtttccggcggcaccgacaaccacctgatgctgatc
agtctggtcaagcagggcctgaccggcaaggcggccgacgcggcgctgggcgatgctcac
atcaccgtcaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtcacctccggc
atccgtatcggcaccccggccgtgaccactcgcggcttcaaggaaggcgaatgccgcacc
ctcgccggctggatctgcgacatcctcgacgacctggaaaacccggccgtgatcgagcgc
gtgcgcagccaggtcgccgacctgtgcgccacctacccggtctacgctgactga
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