Pseudomonas sp. LPH1: BHQ29_17270
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Entry
BHQ29_17270 CDS
T10175
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pslp Pseudomonas sp. LPH1
Pathway
pslp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BHQ29_17270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pslp02022
]
BHQ29_17270
02035 Bacterial motility proteins [BR:
pslp02035
]
BHQ29_17270
Two-component system [BR:
pslp02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
BHQ29_17270
Bacterial motility proteins [BR:
pslp02035
]
Pilus system
Twitching motility proteins
BHQ29_17270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
Pre_tape_measure
AAA_19
HTH_30
AAA_22
cREC_REC
VpsR
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AQZ34844
LinkDB
All DBs
Position
3777265..3778605
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AA seq
446 aa
AA seq
DB search
MNRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAREPFDLCLTDMRLPDG
TGLDLVQHIQQRHPQVPVAMITAYGSLDTAINSLKAGAFDFLTKPVDLGRLRELVATALR
IRSPEGEETPVDSRLLGDSPPMKSLRKQIQKLSRSQAPVYISGESGSGKELVARLIHEQG
PRVEQPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIE
LRVPPLRERREDIAQLADVMLARLADGTGLAAAKLHPDALEKLKNYRFPGNVRELENMLE
RAYTLCEDDQITPSDLRLADASGPGNEGGETSLAQIDNLEDYLEDIERKLIMQALEETRW
NRTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtcagagagccctgatcgtcgacgacgaacccgatatccgcgagctgctggaa
atcaccctcggacgcatgaagctggacacccgcagtgcccgcaacgtcaaggaagcgcgc
gagtggctggcacgcgagccgttcgacctgtgcctgaccgatatgcgcctgcccgatggc
accggcctggatctggtgcagcatatccagcagcgccacccgcaggttcccgtggcgatg
atcaccgcctacggcagcctggacaccgcgatcaactcgctcaaggccggcgccttcgac
tttctcaccaaaccggtggacctcggtcgcctgcgcgaactggtcgccaccgccctgcgc
attcgctctcccgaaggtgaggaaaccccggtcgacagtcgtctgctcggcgactcgcca
ccgatgaagtcgctgcgcaagcagatccagaaactctcgcgcagccaggcaccggtctac
atcagcggcgaatcgggtagcggcaaggaactggtcgcccgcctgatccacgaacagggc
ccacgcgtggagcagccgttcgtaccggtcaactgcggcgcgattccctcggagctgatg
gaaagcgagttcttcggccacaagaaaggtagcttcaccggcgccatcgaagacaagcag
ggcctgttccaggcggccaatggcggcaccctgttcctcgatgaagtcgccgacctgccg
ctgccgatgcaggtcaaattgctgcgcgcgattcaggaaaaagccgtgcgcgccgtcggt
ggccagcaggaagtggtggtcgatgtacgcatcctctgcgccacccacaaggatctggca
gccgaagtcgcagctggccgtttccgccaggacctctactaccggctcaacgtcatcgaa
ctgcgcgtgccgccgctgcgtgagcgccgcgaagatatcgcccagttggccgacgtgatg
ctcgcgcgcctggccgacggcactggcctggccgccgccaagttgcatcccgatgccttg
gagaagctgaagaactatcgcttcccaggcaacgtgcgcgagctggaaaacatgctcgaa
cgcgcctacaccctgtgtgaagacgaccagatcacacccagcgacctgcgcctggccgat
gccagcggccctggcaacgaaggcggcgaaaccagcctggcgcagatcgacaaccttgag
gactacctcgaggacatcgaacgcaagctgatcatgcaggcactggaagaaacacgttgg
aaccgcacagcggcggctcagcgcctgggcctgaccttccgctcgatgcgctatcgcctg
aagaagctgggtatcgactga
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