Pseudomonas sp. LPH1: BHQ29_17305
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Entry
BHQ29_17305 CDS
T10175
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pslp Pseudomonas sp. LPH1
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pslp02044
]
BHQ29_17305
02035 Bacterial motility proteins [BR:
pslp02035
]
BHQ29_17305
Secretion system [BR:
pslp02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
BHQ29_17305
Bacterial motility proteins [BR:
pslp02035
]
Pilus system
Pilus assembly proteins
BHQ29_17305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
SET1_RBD
Motif
Other DBs
NCBI-ProteinID:
AQZ34851
LinkDB
All DBs
Position
3782985..3786683
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AA seq
1232 aa
AA seq
DB search
MTYRHLTLGSYKACASFFLTLCIAAAATPAQATVAQPPLLLGGGNVPGNLALVPSVEFPT
VISVANISNTYSHSATYTGYFDSEKCYEYNRQQITHIYFGTISGNDGGGYFTPTRWSRTC
NGAQEWSGNYLNWATTQTIDPFRMALTGGYRAVDTATQTILEKATRASRTNYFPNRQVTG
NTTLTNISPYTSGTLSSSVTSANSSASAAVQDYQKNKTLRITNGTSTAYFSVRVEVCKSE
ALLESNCVRYGNVWKPEGLIQRYANDIRYSAFSYLNIDGNTRNGGVLRAQQKYVGQSMRV
PGVSGSSTNPDAEWSPTTGIIHTNPHNDATGNSGVINYINKFGELTNVHKSNDPASELYY
TALRYFKNQGNIAAYSNTTNEAQKDKFPVITNWSDPIQYACQKNVILGIGDVNTHEDRNL
PHTDDPLNVNAYTQKVFDLEGINKTASSEFTGRGNSAYIAGLAYYANTTDIRSDVSGKQT
ASTYWVDVREDRTLLGKANNQYWLASKYGGFKVPSDFGPALSRSSALNEAWWYTTNDTLA
LGLDGNGGTERRPDNFFVASDATNMVEGLRKAFAQISNEVQSTTASLATNSTRLETDTAV
FQSLLDNRYWSGDLLAKRIGSDGIVEADAAWNAAQRLDSATDIASRKIFTTTPDTAPGTS
GEFIANNGINFIWNSLTNNQQALLTLPTDAGNVTGANRLAYLRGDRTYEITTEDRTKPFR
QRGSRLGDIVNSDPQFIHNQDFGYSRLNWGTNGSVGSAYTTFRTSTAYRNRTPMVIVGAN
DGMLHGFDARVGEAAENGGSELFAYVPNSVFANLINLTDPAYSHRYYVDGTPRVSDVYIN
GWKTMVVGTTGAGGKSVFALDITNPSNMSSNSVMWEFSHPDMGYTMGQPALVALPSQKFG
VIVSSGYHDNAPTNGKLWILDAADGSIIREITLPTTGNLGSPLASDTNYDMVADRVYVAD
TLGNLWRIDLANNNPSSWEIPSGLNNGPLFIAKDDSNNLQAITAPLSSAFNDKNEHMVLF
GTGSFYRNGDNEIPNNPRVESFYGIIDRGTLIDGRDALLKQAVIKEDTVNGNNVRAITNN
AITTETGWYLDLGWLEGTGATGAKGERVISKATLRTDRVIFTTMTPSADPCAFGGTSFIM
AMNLSSGSRLNYVYFDTNNDGALDESDKATIGDDGEKIPWSGISDVDDGVVKGVTPVGNL
LCFTGSSGSTPKCITGPGSKNVRISWREVRNN
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcgccacctcactctcggctcttataaagcctgtgccagcttcttcctgaca
ctgtgcattgctgcagctgcaacacctgcgcaagctaccgtagcgcagccccccctactg
ctcggcggcggcaatgtacccggcaacttggctctagtgccgtcagttgaatttccaacc
gttatcagcgtagccaacatcagcaacacttatagtcatagcgccacctataccggctat
ttcgatagtgaaaaatgctacgaatataatcgtcaacaaataacacacatttacttcggc
accatcagtggtaacgatggcggcggctactttacccctacgcgctggagccgcacctgt
aacggcgctcaggaatggagcgggaactacctgaactgggctactacccagaccattgac
ccatttcgcatggccctgactggcggttacagggctgtagacaccgcgacccagaccata
ttggaaaaagcgacccgcgcaagccggaccaactatttccctaacagacaggtaactggg
aacaccacgctcactaatatctcaccctataccagcggcaccttgagcagctctgttacc
agcgccaatagcagtgccagcgccgccgttcaggactatcagaagaataagaccctcaga
atcaccaacggtactagtactgcctacttctccgtacgggtggaagtctgcaagagcgag
gcattgctggagtccaactgtgtccgctatggcaacgtctggaagcctgaagggcttatc
caacgttacgctaatgatattcgttatagcgccttcagctacttgaacattgatggaaac
accagaaacggcggcgtactgcgtgcccagcaaaaatatgtgggacaaagcatgcgcgta
cccggagtctccggatcttcgaccaacccggatgcggaatggagcccgactaccggtatc
atccacaccaacccgcacaacgacgcaacaggaaatagtggcgtcatcaactacataaac
aaatttggcgaactcaccaacgtacacaagtccaacgaccctgccagcgagctttattat
acagcccttcgctatttcaagaatcagggaaatattgccgcttactcgaacacaacgaat
gaagcacagaaagataaattcccggtaataaccaactggtcagaccccattcaatacgcc
tgccaaaagaatgtgattctgggtattggtgacgtaaacacccatgaagacagaaacctg
ccgcacaccgatgaccctctgaatgtaaacgcctatacgcaaaaagtgttcgacctggaa
ggcattaataaaacagccagtagcgaattcacaggccgtggtaactctgcctacattgcc
ggcctggcctactatgccaataccacagatattcgtagcgatgtttcgggaaaacagacc
gcctctacctattgggttgacgtacgtgaagaccgaactttgctgggcaaagccaacaat
caatattggctggcatctaagtacggtggcttcaaagtcccctctgactttggtcccgct
ttatctcgctcctctgcgctgaatgaagcctggtggtacaccaccaacgatacgctggca
ctgggtctcgatggcaacggcggtaccgagaggcgccctgataatttcttcgttgccagt
gacgcaaccaacatggtcgaaggtctgagaaaggccttcgcacagatatccaacgaggtg
caaagcacaaccgcctccttggccactaactctacccgcctggaaaccgacaccgctgtt
ttccaatcactgctggacaaccgctactggagtggtgatttgctggccaaacgcataggc
agcgacggtatagtagaggcagatgcagcctggaatgcagctcaacgcctcgatagcgca
acagacatagcctcgcgcaaaattttcaccacaaccccagacaccgcacctggaacttct
ggcgaatttatcgctaacaatggtatcaacttcatctggaatagtctgaccaacaaccaa
caagcgctgctgactttgccgactgacgccggcaatgtgacaggcgcaaacagactagcc
tacttacgtggtgaccgtacttacgaaatcaccaccgaggatcgcaccaaacccttccgc
caacgcggtagccgccttggcgatatcgtcaactccgatccgcagttcattcacaatcag
gacttcggttactcacgtttgaactggggcaccaacggctctgtgggttcagcctataca
accttccgcaccagcaccgcctaccgaaatcgtactcctatggttatagtgggcgctaac
gacggcatgttgcatggattcgacgctcgagtgggagaagccgcagaaaatggtggaagt
gaactattcgcctacgtgcccaatagcgtgttcgccaacctgatcaacctgaccgaccct
gcatactcccatcgctattatgtcgatggcactccgcgcgtatccgatgtgtatatcaac
ggctggaaaaccatggtggtcggcaccactggcgctggcggtaagagtgtgttcgctctc
gatatcaccaaccccagtaacatgagcagcaatagcgtcatgtgggagttcagccaccct
gatatgggttacaccatggggcaaccagccttggttgccctgcctagccagaagtttggt
gttattgtcagcagcggttatcacgacaacgccccaacgaacggtaagctttggattctt
gatgctgcagacggtagcattattcgcgagataaccctgccgaccaccggaaacctgggt
tcaccgctggcttcggacaccaattacgacatggtggcagatcgtgtctatgtggccgat
acccttggcaatctctggcgcatcgacctcgccaataacaatccctcgagctgggaaatt
cccagtggcctgaacaacggcccactatttattgctaaggacgatagcaataaccttcaa
gccatcaccgcaccgctctcttcagcattcaatgacaagaatgagcatatggtgctattc
ggtaccggtagcttctaccgtaacggcgacaatgaaataccaaacaacccccgagtcgaa
agcttctacggcatcattgatagaggaacgcttatcgatggacgtgacgcccttctaaaa
caggcagtgataaaagaagacactgttaatggaaacaatgtccgtgccatcactaataat
gcaataaccactgaaaccggctggtatcttgatcttggctggcttgagggtactggggca
acaggagccaaaggcgaacgtgtcatttccaaggctactctgcgcactgatcgggtgatc
tttaccaccatgaccccctcggcagacccgtgcgcatttggcggaacaagcttcatcatg
gccatgaacctttccagtggatcacgcctgaactatgtctacttcgatacaaacaatgat
ggcgcactggatgagagcgataaagccactatcggcgatgatggcgaaaaaatcccatgg
tctggaatatccgacgttgatgatggcgtggtaaaaggcgtaacaccggttggtaacctg
ttgtgctttaccggctcaagcggctccaccccgaaatgcataaccggtccaggatcgaaa
aatgttcgtatttcctggcgcgaagtgaggaacaactga
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integrated database retrieval system
