Pseudomonas sp. LPH1: BHQ29_18990
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Entry
BHQ29_18990 CDS
T10175
Name
(GenBank) hypothetical protein
Organism
pslp Pseudomonas sp. LPH1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
DUF4347
HYDIN_VesB_CFA65-like_Ig
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
AQZ35152
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All DBs
Position
4160516..4166899
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AA seq
2127 aa
AA seq
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MLFDGAVAATVAETTTAPGADSSSGHDANVTPDNLAAAPSSATSDQRQEVVFIDASVKDK
QQLLDSLVAGTEVVILDADRDGLAQMAEYLDGRSGIDAIHFISHGGEASLQIGSTRLGLD
NIANAQSKLAAIGNSLTESGDFLVYGCDTSKGEQGAAFVTQLANFTGADIAASNDWTGDA
SKGGDWVLETSTGAIEAATLFADAGYDHVLNTLNAGDIVVLGWNAVNDTVTLATLVDIPA
GTVIKITDKGWDQATNAFTPLSTGDGVVTWTTSGAISAGNIFTLFLGGADEPTTLTNITT
GAVLTSDISTSGFTTANDPMILSGDSIFIYQDADNNPYFIFGMNNSAGVVDANGWNTSIA
AGLRDSMTPNGNGSQNALTNGVNAIGLPGGASQQDNVQYTGATTTANRATWLARIANSAN
WSGDGDGSTATSVGVSGGSEVNILPPNVAPIINNLNGDSTTFTEGGSAVRLDAGSNATVT
DADSANFDGGNVTAAITANGTAGEDVLAIHNEGTGAGQISVSGSTVSYGGTAIGTISSSG
TGGASLVVTLNASANAAAVQALIRNLTYANGNDAAPSTAARTVSITVNDGDGGTSTAAQV
TVNVIGVNDAPTITATGNNPTYTENGSAVDLFNNVSINTIETGQTITGMTLTVTNLANGS
DELLRIDGTDIALLNGNSGTTAGNGISYSISLVGSTATITLSSVGGLNATTAQTVVDGMG
YRNSSDAPSTATRVITLTSITDSGGTANGGVDTSATSIATSVSVVAVNDAPIVTSSGGAS
TFTEGDGGTVIDSGLTLSDLDNSTLASATVSITGNFQSGDVLSFINDGSTMGNITATYDA
GTAAMTLTSAGATATLAQWQAALRSVTYSNSSDAPSTANRTISFVANDGQNDSTAATKVV
SVMAVNDAPEITAPVSIAVTEDMPSAITGISFSDVDAGSANVTVTLSISSGTLSATSGGA
VTVGGTASALTLTGSIANINSFIAGSNLSFTTAANATADVTLTVNINDGGNTGNGGAQSA
NETITLEVTAVNDAPTITAPASIAITEDIPGALTSISFSDVDAGSSNVTVTFSVPSGTLS
ATSGSGVTVGGTASALTLTGSITDINAFIAASGISFTTASNATANVTLTVSINDGGNTGS
GGAQTDTTTVTLTVTAVNDAPVNSVPAAQSVDQDANLVFNSGNGNLISISDVDAGSNMVE
VTLSATNGLLSLSDITGLSFSTGNGTGDASMTFTGSLSAINNALDGLVFTPTGGYNGPAS
ITIVTNDQGWSGSGGAQTDTDTISITVNSLNPRITDVSAGTADGIYKVGDTITITATFSE
AVTVDTTGGIPTLLLETGTVDRLGTYVSGSGSNTLTFSYVVQAGDLSVDLDYQSTAALNL
NGSTIRGAAANDAILTLPTPGAAGSLGANKALVVDGVRPAATSITLSDTTLGIGETATVT
ITFNEAVLGLDVGDFNVANGALSGLSSSNGGLTWTATFTPIGNITDASNIITLDNTGVMD
LAGNIGSGSTDSGNYAIDTENPTASIVVTDTALKAGQSTTVTITFSEAVVGLTTADFTVA
NATLSNLTTSDNITWTATLTPDANVTDATNLITLDNFGYTDIAGNPGGAPTDSNNYAIDT
QRPTASIVVTDTALKAGQSTTVTITFSEAVSGLTTADFSVANGTLSNLSSSDGGLSWTAT
LTPDADVTDATNLITLDNTGYSDAAGNTGTGTTDSNNYAIDSKAPTVTSVAVPANGTYVA
GDTLDFTVNFDEAVTVDTTGGTPRLAITLDTGGTVYANYLSGSGSTALVFRLSVANGQQD
SNGIAIGTNLQSNGATLRDAAGNDTATTLNNVGATSAVLVDAAPPQVTGIALDGTSPTTN
TTLGFTVTFSEDVNGVDLADFALSTTGSASGTLLSLVQIDARTYRITVGGVTGQGTLGLS
LTAVGSGIADAVGNALQSNFSSTGYTLGGLNTGDPEFRANPTPNVPTTPTAPPQPNVPGA
PPSNTTSPLLPPPLFEQPTLGSGVPTVGNIFINNGALAPSYIAQVFASSDSGAGNGSGIG
FLGFGGGDGGVFGTSSFSSMFNKDVPLESGEIQLRWGTSSGNGLGGGEILGAPTLSQQLQ
EIGESEQRQIRELAWALGEIPLQMPQA
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgacggtgctgtggctgccaccgtagccgaaacaacgaccgcccctggtgca
gattcatcgtctggacacgatgccaatgtcacccccgataatctggccgcagccccgtcc
tcggcaacttcggatcagcgtcaagaggtcgtgttcatcgacgccagcgtcaaagacaag
cagcaactgctcgatagcctggtcgccggtacggaagtcgtaatcctcgatgcggatcgg
gacggcttggcgcaaatggcggaataccttgatggtcgctccggcatcgatgccatacat
ttcatctctcacggtggcgaggccagcctccagatcggatcaacgcgccttggtctggac
aacatcgccaatgcgcagagcaaacttgccgccatcggcaacagcctgacggaaagcggc
gacttcctcgtttatggttgtgataccagcaaaggcgaacaaggtgccgccttcgtaacg
caactcgccaacttcacgggggccgatatcgctgcatcgaatgactggaccggcgacgcc
agcaaaggcggcgactgggtgctggaaaccagcactggcgcgatcgaagctgcaaccctg
tttgccgatgcgggttacgaccatgtgctcaacaccctcaatgccggtgatattgtggtg
ctgggttggaatgctgttaatgacacggtcaccttggcgacactggtcgacattcccgca
ggcactgtcatcaagatcaccgacaagggctgggatcaggcgaccaatgcgttcactccc
ttatcgaccggtgatggggtggtgacttggaccaccagtggagcaattagcgctggcaat
atcttcacgctgttccttggaggggcagacgaaccgaccacattgaccaacatcaccacc
ggtgcagtacttaccagcgacatctcaacatcgggttttactactgctaatgaccctatg
attctctcgggagatagcatctttatctaccaagatgcagacaataatccttattttatt
tttggcatgaacaattcagccggcgtggtcgatgcgaacggttggaatacgtccatcgca
gccggtctgcgcgactccatgacgcctaatggcaacggcagccagaatgccctgaccaat
ggagtcaatgccatcggtctacctggaggggccagccaacaggacaacgtgcagtacacc
ggcgcaacgactaccgccaaccgtgccacctggctggcacgcatagccaactcggccaac
tggtcaggagacggcgacggaagcaccgcaacaagtgttggagtcagcggcggcagtgag
gtcaacatcctccctcctaacgttgcccccatcatcaacaacctcaacggtgattccacg
accttcaccgagggtggcagtgccgtacggctcgacgctggcagcaacgccaccgtcacc
gatgccgactccgccaacttcgacggtggcaacgtgaccgcagccatcaccgcaaacggc
acagctggcgaggatgtactggcgatccacaatgagggtacgggggcaggccagatcagt
gtatcaggcagtaccgtaagctacggcggcaccgccatcggcaccatctcctccagcggc
acgggcggcgccagcctggtcgtcaccctcaacgccagtgccaacgccgctgccgtccag
gcattgatccgcaacctgacctacgccaacggcaatgacgccgccccgagcaccgctgca
cgcaccgtcagcatcaccgtcaacgatggcgatggcggcaccagcacggcggcacaggtc
accgtgaacgtgattggcgtcaacgacgccccgaccatcaccgccacaggcaacaatccc
acctacaccgaaaatggcagtgcggttgatctgttcaacaatgtcagcatcaacaccatc
gaaaccggccagaccatcaccggtatgaccctgaccgtcaccaacctggccaatggcagt
gatgagctcctgcgcatcgacggcaccgacatcgcattgctcaacggcaacagtggcaca
acggcaggcaatggcatcagctactcgatcagcctcgtcggcagtacggcgaccatcacc
ctgagcagtgtcggaggccttaatgcgacaacggcgcaaaccgtggtcgatggcatgggc
taccgcaacagcagcgatgccccgagcaccgcaacgcgtgtcatcacccttaccagcatc
accgacagcggcggcacggccaacggtggcgtagacacgtctgcgacgtcgatcgccact
tcggtatccgtggttgccgtcaacgacgcgccaatcgttacctccagcggtggcgccagc
acgttcaccgaaggggatggcggcacggtgatcgattccgggctgaccctgagcgacctg
gacaactccaccctggccagcgccacagtatctattaccggcaacttccagtctggcgac
gtgctgagtttcatcaacgatggcagcaccatgggcaacatcaccgccacctatgacgcc
ggcaccgctgcgatgacactgacctcggcgggcgccacggccaccctcgctcagtggcag
gcagccctgcgttcggtgacgtacagcaatagcagtgatgcgcccagtactgccaaccgc
acgatcagcttcgtcgccaacgatggccagaacgacagtacggccgccaccaaggtcgtc
agcgtgatggccgtcaatgatgccccagagatcacggccccggtgagcatcgccgtcacc
gaagacatgcccagcgccattaccgggatcagcttcagcgatgtcgacgccggtagcgcc
aatgtcactgtcaccctgtcgatcagctccggcaccctgtccgcgaccagcggcggcgcc
gtcactgttggcggtactgcgtcggcgctgaccctgaccggcagcattgccaacatcaac
agctttatcgctggcagcaacctcagctttaccaccgcggccaatgccaccgccgatgtg
accctgacggtgaacatcaacgatggcggcaacactggcaacggtggcgcacaaagtgcc
aacgagaccatcacgctagaggttacggcggtcaacgacgcaccgacgatcacagcacca
gcctccatcgccatcaccgaagatattcccggcgcattgaccagtatctcgttcagcgat
gtcgacgctggtagcagcaatgtgacggtgacgttctcggtacccagcggcacgctcagt
gccaccagcggcagcggtgtcaccgttggcgggaccgccagcgctctgaccctgaccggc
agcattaccgatatcaatgccttcatcgcggcatccgggatcagcttcaccacagccagc
aacgccactgccaacgtcaccctgacagtcagtatcaacgacggcggtaacaccggcagc
ggcggcgcacagaccgataccaccaccgtaaccctcacggtcaccgccgtgaacgatgca
ccggtcaactcggtacccgctgcacagagcgtcgatcaggacgccaacctggtcttcaac
agcggcaatggcaacctgatcagcatcagcgacgtggacgccggctccaatatggtcgaa
gtcaccctgagcgccaccaatggtctgctcagcctgagcgatatcaccggcctgtcattc
agtaccggcaacggcacaggcgatgccagcatgacttttaccggcagcctctccgcgatc
aacaacgccctggatggcctggtattcacaccgacaggtgggtacaacggcccggccagc
atcaccatcgtgaccaacgatcagggttggagtggcagcggcggcgcgcagaccgacacc
gacaccatcagcatcacggtcaacagtctcaacccacgtatcaccgatgtcagcgccggc
acggcagacggcatctacaaagtgggtgataccatcaccatcaccgccaccttcagtgag
gccgttacagtcgacacgacggggggtatccccacgctgctgctggaaaccggcactgtc
gaccgcctcggaacctatgtttccggctccggcagcaacacgctgactttcagttatgtg
gtgcaggccggagatctcagcgtggacctggattaccagtccacggcagccttgaacctc
aatggatcaactatccgtggcgcggcggccaacgatgccatcctcaccttgccgacgccc
ggcgctgcaggttccctgggcgccaacaaggcactggtagtagatggtgtacgcccggct
gccaccagcatcaccctcagtgacacgaccctgggcataggcgaaaccgccaccgtcacc
atcaccttcaacgaggcggtgctcggcctggacgtcggcgacttcaacgtagcaaacggc
gctctaagtgggctcagtagcagcaacggaggcctgacctggaccgcaactttcaccccg
atcggcaacattaccgatgccagcaacatcatcaccctcgacaacaccggcgtgatggac
ctggccggcaacatcggtagcggcagcaccgactcgggcaactacgccatcgacaccgag
aacccgaccgccagcatcgtggtcaccgataccgcgctcaaggctggacagagcaccacc
gtcaccatcaccttcagcgaagcggtggtaggactgaccacggcagacttcaccgtcgcc
aacgctacgctgagcaacctgaccacttcggacaacatcacctggacggcgaccctgaca
ccagacgccaacgtcaccgatgcgaccaacctgatcaccctggacaactttggctacacc
gacattgccggcaaccccggaggcgcccccaccgactccaacaactacgccatcgatacc
cagcgcccaacggccagcatcgtggtcactgataccgcgctcaaggctgggcagagcacc
accgtcaccatcactttcagtgaggcagtgagcgggctgaccacggcggacttcagcgtg
gccaacggcacgctgagcaacctcagcagcagcgatggcggcctgagctggacggcgacc
ctgacgcctgatgccgacgtcaccgatgcgaccaacctgatcactttggacaacaccgga
tacagcgatgccgctggcaacaccggcaccggtaccaccgactccaacaactacgccatc
gacagcaaggcaccgaccgtcacctcggttgccgtgccagccaacggcacctacgtggcg
ggggacaccctcgacttcacggtgaacttcgacgaagccgtgaccgtcgacaccacgggc
ggcaccccgcgcctggcaatcactctggacactggcggcaccgtctacgccaactacctg
agtggctcgggtagcaccgcgctggtgttccgcctgagcgtcgccaatggccagcaggac
agcaacggcatcgccatcggtaccaacctccagagcaacggcgcgacactacgcgatgcc
gccggtaacgacacagcgacgactctcaacaacgtcggcgccaccagcgccgtgctggtt
gatgccgccccaccacaggtgacaggtatcgccctcgacggcacatcgcccaccaccaat
accaccctcggcttcaccgttaccttcagcgaagacgtcaacggcgtcgatctggccgac
ttcgcgctatccaccaccggcagcgccagcggtaccctgctctcgctggtacagatcgat
gcacgcacctatcgcatcaccgtcggcggtgtgacaggccagggtacgcttggcctgtcg
ctcacggcagttggtagcggcatcgctgatgccgtcggtaacgccctgcagagcaacttc
tccagcaccggctacacgctgggcgggctcaataccggcgatccggagttccgcgccaac
ccgacgcccaacgtacccactacaccgaccgcaccacctcaacccaatgtgcccggcgcg
ccgccctccaacaccacctcgccactgttgccgccgccactgttcgagcagccgactctc
ggtagcggcgtaccaacggtgggcaacatcttcatcaacaacggtgcgctggcgcccagc
tacatcgcccaggtctttgccagcagcgacagcggtgccggcaatggcagcggcattggt
ttcctcggctttggcgggggcgacggcggcgtgttcggtaccagcagtttctccagcatg
ttcaacaaggacgtaccgctggaatcaggcgaaatccagcttcgctgggggacttccagc
ggcaatggcctgggcgggggagagattctcggagcaccgactctgagccagcaactgcag
gagatcggtgaaagcgaacaacgccagataagagagcttgcctgggcgttgggagaaatt
ccgttgcagatgccacaagcgtaa
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