Pseudomonas sp. LPH1: BHQ29_22345
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Entry
BHQ29_22345 CDS
T10175
Name
(GenBank) type IV secretion protein Rhs
Organism
pslp Pseudomonas sp. LPH1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
PAAR_motif
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-ProteinID:
AQZ35757
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All DBs
Position
complement(4901017..4905456)
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AA seq
1479 aa
AA seq
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MSDALWAARLGDDLLHTTLLADIVGGVLEVAAYAAITAVACAAVVAATGLTVLTGGLGGF
VLAAVVGIAVGVGMNKTGWDKGLTTLCEGLGNAISPPNVQAKILTGANKTKTNGLPSARA
AGKLGSAAAPAGTELEQAPPAEEPEPSFLDMAKSFFSEMWQPTVAQPAPGVIPCPLDSIE
CKKHPPMPVQLLAEGSIKVSIEGQPAVRSGDRSTCEATVVDSGNISPNVRIGGDAVVVQP
IRSGKTPGIGLALTVLMALRGNPRKLCSKLPCLVAGFAGNMAMGGATAYATNSIVNALGS
ASSGAPNPVHASTGAKVLGEDDDLDFVLPGLMPIEWQRFYSSCDERRDGLLGAGWSLPFE
IAVQVRAHPQGGEALTYIDEQGRPIEIGSLPPGDACYSPGEGLNFRRDESGALLVESVDG
LYRLFEPLPDAPQRLRLSKLGDRNDNRLLLEYDAAGRLRAVRDGHNQLCIELIADAQHPQ
RLGRVERLFADERREVLVAYAYDAQGDLSEVRDDKGQLLRRFVYDSGRRLIEHQRPTGLR
CFYEWGEFQGADGREWRVTRHWTDEGDEYHLHYDLDAGITRVTDGLGRTSERHWNSQYQI
TRYRDALGQLWLFEWNDERQLLAAVAPDGARWQFAYDESGNLCETLDPLGRRDFTQWLGH
WSLPEAETDAAGNAWQYRYDKRGNCIAEIDPLGHVTRYRYDTSGLPVEIIDASGKRKTLR
WSALGQLTEQVDCSGYPTRFAYDERGNLVQITDALGEITRYHYDSQGRLLQTQLADGRCE
EFQRDAIGQLSAYLDPAGKPVRYRYDRRGQVRQRIDALGRSVGFEYDAYGRLLALSNEND
ERYRFTWDVLDRLTAQHDLDDSARHYRYDPQGNLIALAYTPEPHGTGLGSVPEAPPAPII
HRFERDAVGRMIAKHTDDGRTEYAYDPLDRLTGIDFTAVDGQVQSLAFAYDALGQLLSEQ
SAAGTLQHAYDELGNLLETQLPDQRRIRRLYYGSGHLQLLHLDDQLVSRFERDRLHREVL
RTQGQLVTRSQYDRTGRLTARLRRRLETPVQLPAEAERRYAFDPSDNLIGRLDRDPTSQR
EQKQQLHYDASGRIIASQDLIRGNLETYSYDAAANLLHPVGGDAASSGWVRHNKLLTYQD
KRYRYDAFGRLVEKRSGRHQVQRLSYDAEHRVREVTNNDGSRVIMHYDPLGRRIGKSHYD
AHGVLLGQTDFTWDGLRLLSETRNGRHSLYLYDEGSYDPLARVDGQGEHARLRYYHTDPN
GLPQQLTEDDGRCIWQARYQVWGNTLAEQQESFFVEEQNLRFQGQYLDRETGLHYNTFRF
YDPDIGRFISPDPIGLAGGINLFQYAPEPYGWVDPWGWKCWSSSRRSYWKNAAKNSPPGK
FSPRNLSRMRRGLAPRMVVKVRYKDTLTNRVKGRVGQERNITVPIELNHQYIPQRSGSST
VAHEGWNLQPATPWGHASMDPYRNLGWDLIKIITPVNKF
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcgctctgggccgcccggctcggcgacgatctgctgcacaccacattgctc
gccgatatcgtcggtggcgtgctggaagtggctgcctatgccgccatcaccgccgtggcc
tgtgccgcggtggtcgccgccaccggcctgactgtccttaccggcggtctcggtgggttt
gtcctcgcagcagtagtgggtatcgccgtgggggtcggcatgaacaaaaccggctgggac
aagggtctcacgaccctctgcgaaggcctgggcaacgccatctccccgcccaatgtccag
gccaagatcctcaccggcgccaacaagaccaaaaccaacggcctgccttccgcgcgcgcc
gctggcaagttgggcagcgccgctgcgccggccggcaccgagctggagcaggcgccgccc
gccgaggagcctgagcccagcttcctcgacatggccaagagcttcttcagtgagatgtgg
cagccgacggttgcccagccggcaccgggcgtcatcccctgcccgctggattccatcgag
tgcaagaagcacccgccgatgcccgtgcaattgctcgccgaaggttcgatcaaggtcagc
atcgaaggccagccggcggtgcgcagcggtgaccgcagcacctgcgaggccacggtggtg
gacagcggcaacatctcgccaaacgtgcgcatcggtggtgacgccgtggtggtgcagccg
attcgcagcggcaagacccctggcatcggcctggccctgactgtgctcatggcgctgcgt
ggcaacccacgcaagctgtgcagcaagctgccctgcctggtcgccggtttcgccggcaac
atggccatgggcggcgcgaccgcctatgccaccaattccatcgtcaacgcccttggttcg
gccagcagcggtgcgcccaacccggtgcacgccagtaccggggccaaggtgctcggcgaa
gacgacgacctcgacttcgtcctgccggggctgatgcccatcgagtggcagcgcttctac
agcagctgcgacgagcgccgtgacggtttgctgggggctggctggagcctgccgttcgag
atcgccgtgcaggtgcgcgcccacccgcagggtggcgaagcgctgacctatatcgacgag
cagggccgccccatcgagatcggcagcctgccaccgggcgatgcctgctacagcccgggt
gaaggcctgaacttccgccgcgatgaaagcggtgcactactggtggaaagcgtcgatggc
ctctatcgtctgtttgagcctctgcctgacgcgccgcagcggctgcgcctgagcaagctg
ggtgatcgcaacgacaaccgcctgctgctcgaatacgacgccgctggccgactgcgcgcc
gtgcgcgatggccataaccagctgtgcatcgaattgattgccgacgctcagcacccgcag
cgcctgggccgggtcgagcgcctgttcgccgatgagcggcgcgaggtgctggtcgcctac
gcctatgacgcccaaggcgatctcagcgaagtccgcgacgacaagggccaactgctgcgt
cgcttcgtctacgacagtggccggcgtctgatcgaacaccagcgtcccacaggcctgcgc
tgcttctatgagtggggcgagtttcagggtgccgatggccgcgaatggcgggtgacacgg
cactggaccgacgaaggcgacgaataccatctgcattacgatctggatgcgggcatcacc
cgggtcaccgatggccttggtcgcaccagcgaacgccactggaacagccagtaccagatc
acccgctatcgcgacgccctcggccagctctggctgttcgaatggaatgatgaacgtcag
ctgctggccgccgttgctcccgacggcgcgcgttggcagtttgcctatgacgaatccggc
aacctctgcgaaaccctcgacccgctggggcgccgtgacttcacccagtggcttggtcac
tggtcgctgccggaagccgagacggacgccgccggcaatgcctggcagtaccgctatgac
aagcgcggcaactgcatcgccgagatcgacccgctgggccatgtcacccgctaccgctac
gacaccagcggcctgccggtggagatcatcgacgccagcggcaagcgcaagaccctgcgc
tggagcgccctcggccagctcaccgagcaggtcgactgttccggctacccgacgcgcttc
gcctacgacgagcgcggcaatctggtgcagatcaccgatgccctcggcgagatcacccgt
taccactacgacagccagggacgcctgctgcagacgcaactcgccgacggccgctgcgag
gagtttcaacgcgacgccatcggccagctcagcgcctacctcgaccctgccggcaagccc
gtgcgctatcgctatgaccggcgtggccaggtgcgccagcgcatcgatgccctgggccgc
agcgtcggtttcgagtacgacgcctatggccgcctgctcgccctgagcaacgagaacgac
gaacgctaccgcttcacctgggacgtgctcgatcgcctcaccgcccagcatgacctagac
gacagtgcccgccattatcgctacgacccgcagggcaacctgatcgccctggcctacacc
ccggaaccccatggcaccggcctgggcagcgtcccggaggcgccgccggccccgatcatc
caccgcttcgagcgcgatgccgtgggccggatgatcgccaagcacaccgatgacggtcgc
accgaatacgcctacgacccgctcgatcgcctgaccggtattgacttcaccgccgtcgac
ggccaggtgcagtcgctggccttcgcctacgacgccctcggccaattgctcagcgagcag
agcgctgcaggcaccttgcagcatgcctacgatgaactcggcaacctgctggaaacgcaa
ctgcctgaccagcgccgtatccgccgcctgtactacggcagcggccacctgcagttgctc
cacctcgatgatcaactggtcagccgcttcgagcgcgaccgcctgcatcgcgaggtgctg
cgcacccaggggcagctcgttacccgtagccaatatgaccgcaccggacgtctcactgcg
cgcctgcgtcggcgtctggaaacgcccgtgcaactgccggccgaagccgagcggcgctac
gcctttgatcccagcgacaacctgatcggccgtctcgaccgtgacccgaccagccagcgc
gaacagaagcagcagctgcactacgacgccagcgggcgcatcatcgccagccaggacctg
attcgcggcaatctggaaacttacagctacgacgcggccgccaacctgctgcacccggtc
ggtggtgatgccgccagcagcggctgggtgcgccacaacaaactgctcacctaccaggac
aagcgctaccgttacgacgccttcggccgcctggtggaaaaacgcagcggtcgtcaccag
gtgcaacggctgagctacgacgctgaacaccgcgtgcgggaagtcaccaacaacgacggc
agccgcgtgatcatgcactacgatccgctcggccggcgtatcggcaaaagccactacgat
gcccacggcgtgctgctcggccagaccgacttcacttgggacggcctgcgcctgctcagc
gaaacccgcaacggccggcacagcctctacctctacgacgagggcagctacgacccgctg
gcacgcgtcgacggccagggcgaacacgcccgcctgcgctattaccacaccgaccccaac
ggcctgccgcagcaactcaccgaagacgacggccgctgcatctggcaggcccgttatcag
gtctggggcaacaccctggccgaacagcaggaaagcttctttgtcgaagagcagaacctg
cgcttccagggccaatacctggaccgcgaaaccggactgcactacaacaccttcaggttc
tacgatccggatatcgggcggtttatcagcccggatccgattgggttggcgggtgggatc
aacctgttccagtacgcgccggagccgtatgggtgggtggatccgtggggttggaagtgc
tggagttcctcaaggcgtagttattggaaaaacgcggctaaaaattctccgcctggaaaa
ttctctcctcgaaatctaagcagaatgcgcagggggctcgcgccacggatggtcgtaaaa
gtaaggtacaaagatactttgacgaatagagtcaaaggtcgcgttggccaagaaagaaac
attacggttcctattgagctaaatcaccaatatatcccgcagcgctcagggtcgagcaca
gtagcacatgagggctggaaccttcagccagctactccctgggggcacgcatcaatggac
ccttatcgaaaccttggatgggatctgataaaaataattacccctgtaaataaattttag
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