Pseudomonas sp. LPH1: BHQ29_22395
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Entry
BHQ29_22395 CDS
T10175
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
pslp Pseudomonas sp. LPH1
Pathway
pslp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pslp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BHQ29_22395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pslp02044
]
BHQ29_22395
Secretion system [BR:
pslp02044
]
Type VI secretion system
Imp/Vas secretion system core components
BHQ29_22395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
BMFP
RRF
Motif
Other DBs
NCBI-ProteinID:
AQZ35767
LinkDB
All DBs
Position
complement(4915524..4917017)
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AA seq
497 aa
AA seq
DB search
MSEQLQQDRAALASTEQTSEFASLLMQEFKPKTERAKEAVETAVRTLAEQALAQTDLISN
DAIKSIESIIAAIDAKLTAQVNQIIHHSDFQQVESAWRGLHYLVNNTESDEQLKIRVLNI
SKPELHKTLKKFKGTAWDQSPVFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGE
LSKVCAAMHAPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIG
LTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHYGWCS
RIRGVESGGEVPNLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDF
AAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKERDEM
QLWLQDWILKYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYNSKFYLRPHYQLEG
LTVSLRLVSKLPSAKGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagttgcaacaagaccgggccgcactggccagcaccgagcagaccagcgaa
ttcgcttcgctgctgatgcaggaattcaaacccaagaccgagcgcgccaaggaggcggtg
gagactgccgtgcgtaccctggccgagcaggctctggcgcagactgatctgatctccaat
gatgcgatcaaatcgatcgagtcgatcatcgccgccatcgacgccaagctcaccgcgcag
gtcaatcagatcatccaccacagcgacttccagcaggtggaaagcgcctggcgtggcctg
cactacctggtcaacaacaccgagagcgacgagcagctgaagattcgcgtgctcaacatc
tccaaaccggagctgcacaagacactgaagaaattcaagggcaccgcctgggaccagagc
ccggtgttcaagaagctctacgaagaggaatacggccagttcggtggcgagccctacggc
tgcctggtcggcgattactacttcgaccagtcgccgcccgatgtcgagctgctcggcgag
ctgtccaaggtctgcgccgcaatgcatgcaccgttcatcgcggctgcttcgccgacggtg
atgggcatgggctcctggcaggagctgtccaacccgcgtgacctgaccaagatcttcacc
acaccggaatacgccggctggcgctcgctacgcgagtccgaggattcgcgctacatcggc
ctgaccatgccgcgcttcctggcacgcctgccgtatggcgccaagaccgatccggtagaa
gccttcgccttcgaggaaaacaccgacggcgccgacagcagcaagtacacctgggccaat
gccgcctacgccatggcggtgaacatcaaccgctcgttcaagcactacggttggtgctcg
cgtattcgtggcgtcgagtccggtggcgaggtgccgaacctgccggcgcataccttcccc
accgacgacggtggcgtggacatgaagtgcccgaccgagatcgccatctccgaccgccgc
gaagccgagctggcgaagaacggcttcatgccgctgctgcacaaaaagaacaccgacttc
gccgccttcatcggtgcgcagtcgctgcagaaaccggccgagtacgacgacccggacgcc
accgccaacgccaacctggccgcgcgcctgccgtacctgttcgccacctgccgtttcgcg
cattacctcaagtgcatcgttcgcgacaagatcggctcgttcaaggagcgcgacgagatg
cagctgtggctgcaggactggattctcaagtacgtcgacggtgaccccgctcactccacc
gagaccaccaaggcccagcatccgctcgctgctgccgaagtcgtggtcgaggaggtcgag
ggcaacccgggttattacaactcgaagttctacctgcgcccgcactaccagctcgaaggg
ctgacagtgtcgctgcggctggtttccaagctgccgtcggccaagggcgcctga
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