Pseudomonas sp. LPH1: BHQ29_22430 Help Entry BHQ29_22430       CDS       T10175                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism pslp  Pseudomonas sp. LPH1 Pathway pslp02025   Biofilm formation - Pseudomonas aeruginosa pslp03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pslp00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     BHQ29_22430  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     BHQ29_22430  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pslp02044]     BHQ29_22430 Secretion system [BR:pslp02044]  Type VI secretion system   Imp/Vas secretion system core components    BHQ29_22430 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF3379 Motif Other DBs NCBI-ProteinID:  AQZ36366 LinkDB All DBs Position 4923667..4927158 Genome browser AA seq 1163 aa AA seqDB search MFGFITRWVIPVLGLIALSLIIWFVGPLLNALQPAWTRWTLIILLFALWLGWRLFCLLRE RQQERKVLDSLAAQTPPDAASVATAEELATLRQRMDEALALLKKARLGGDERRNLYQLPW YVIIGPPGSGKTTALVNSGLNFPLAAQLGAGAIRGVGGTRNCDWWFTDEAVLLDTAGRYT TQDSHAQVDKAAWLGFLDLLKSQRARRPIDGAFIAISLSDLLQSSDSERAAHVAAIRSRV QELYSQLGVRFPVYVMLTKCDLVPGFMEFFDDLSREERAQVWGFTFALDDGKSIGGPLES FDSEFAALEQRLNQRLVERLQRERDPARRDLIYGFPQQFAAIKSLLGEFLNGVFKPNAYE ERTLLRGLYFTSGTQEGSPIDRLIGAMAQSMSLDRQHLARQSGSGRSYFLQHLFSRVAFA ERGLVGVDQKVERRRRWLAIGSLAASVALVVVVSTLWLLSFNANREHIAQVGARTVPLEQ QVRSLSPAQRDVLAVLPLLSAVRNLAGDPPDWAKGLGLYQGDMLEEQAASVYRRLLVATF APRLLSRIEEQLRTGGGTDYLYEGLKAYLMLGGGKHYDAEFIKAWIALDWDQSLPRDLPG EQRQALDGHLQALFERRPPDARLDQRLIDELRMQLQRLPLAQRVYDRVKRQKLPAGVSDF RLSEAAGRDAALVFTRKSGKALSDPLSGFYTRRGYREAFLRASVGQASVVAEEQWVLGRQ LDSTQDAVNLAADVRQLYLRDYVQQWDTLLADLDFVPITSVAQAADVLRILSGPSSPLKQ LLIAVAQETDLQQAPESEGVAKATDEGVDQLKQKLGSLLGQTQAGNAVAAVTQIDPVSAH FAELNSLVSQDPSAPMAIDGLLADLNELYVQLSSMVGASGEALLGEAKNQASAAAARVNL TAARQPKLVQGLVGSVVAASTNSMMGGVRNQLNAAWQSDVVNVWRQSLSGRYPMVPGSQR DATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSARNWRWQPGAAQKLGISAGVLQTFQRAA LIRDEFFRSGGLQPSVRFDLKPVSMDATISQSQLDLDGQLIGFDHGPSRPVAVQWPNPGS VGVVRLTVSPPVEGGRSALTLEGPWAWFRLLDQSELIGGASPDRFNLRVRLDRSSVAYEL RASSAFNPFKSRAVAGFTLPERL NT seq 3492 nt NT seq  +upstreamnt  +downstreamnt ctgttcggattcatcacccgctgggtcatcccggtactcgggctgatcgccctgagcctg atcatctggttcgtcggacccctgctcaatgcattgcagccggcctggacgcgctggacg ctgatcatactgctgttcgccctgtggctcggctggcgcctgttctgtctgctgcgcgaa cgccagcaggagcgcaaggtgctcgacagcctggccgcgcaaacgccgccggacgccgcc agcgtagccaccgccgaggagctggcgaccctgcgccaacgcatggacgaagccctggcg ctgctgaaaaaggcgcgcctgggcggcgatgagcgacgcaacctgtatcagttgccgtgg tacgtgatcatcggcccgccgggttccggcaagaccaccgcgctggtcaactcggggctg aatttccccctcgcggcccagctgggcgctggcgccattcgtggtgtgggcggcacgcgc aactgcgactggtggttcaccgacgaggccgtgctgctcgacaccgccgggcgctatacc acccaggacagccatgcccaggtggacaaggccgcctggctcggctttctcgatctgctc aagagccaacgcgcgcgtcgcccgatcgatggtgccttcatcgccatcagcctctccgac ctgctgcagagcagcgacagcgagcgcgccgcacacgtggcggcgatccgctcgcgggtg caggagctgtacagccagctcggcgtgcgcttcccggtctacgtgatgctcaccaagtgc gacctggtgccgggcttcatggagttcttcgacgacctcagccgtgaggaacgcgcccag gtctggggcttcaccttcgccctggatgacggcaagagcatcggcggcccgctggagagt ttcgacagcgagttcgccgccctcgagcaacgcctgaatcaacgtctggtcgagcgcctg cagcgcgaacgtgatccggcccgacgcgacctgatctacggtttcccgcagcagttcgcg gcgatcaagagcctgctcggcgagtttctcaatggcgtgttcaaacccaatgcctacgag gagcgcaccctgctgcgcggcctgtacttcaccagcggtactcaggaaggcagcccgatc gaccgcctgatcggtgccatggcacagagcatgagcctcgaccgccagcacctggcgcgg cagagcggcagtggtcgcagctatttcctccagcatctgttcagccgcgtcgcattcgcc gagcgcggcctggtcggcgtcgaccagaaggtcgagcgccgccgcaggtggctggccatc ggctcgctggcagccagcgtggcgctggtagtggtggtgagcacgctgtggctgctcagc ttcaacgccaaccgtgagcatatcgcccaggtcggcgcgcgcaccgtgccgctggaacaa caggtgcgcagcctcagcccggcgcaacgcgatgtactggcggtactgccactgctcagc gccgtacgcaacctggctggtgacccaccggactgggccaagggactgggtctgtatcag ggcgacatgctcgaagagcaggccgccagcgtctatcgccgcctgctggtggccaccttc gccccgcgcctgctcagccgaatcgaggaacagctgcgcactggcggtggcaccgattac ctctacgaagggctcaaggcctacctgatgctcggtggcggcaagcactacgacgccgag ttcatcaaggcctggatcgctctggattgggatcagagcctgccgcgcgacttgccgggc gaacagcgccaggcgctcgacgggcatctgcaggcgctgttcgaacgtcgtccaccggac gcgcgtctggatcagcgcctgatcgacgagctgcgcatgcagctgcagcgcctgccgctg gcgcagcgtgtgtatgaccgggtcaagcggcagaagctgccggccggggtcagtgacttc cgcctcagcgaggccgccgggcgtgacgccgcactggtcttcacgcgcaagagcggcaag gcgctgagcgacccgctgagcggtttctacacccgccgtggctaccgcgaagccttcctc cgcgccagcgtcggtcaggccagcgtggtggccgaggaacaatgggtgctgggccgtcag ctcgacagcactcaggatgccgtgaacctggccgcagacgtgcgccaactgtacctgcgc gattacgtacaacagtgggatacgctgctggccgacctcgacttcgtgccgatcaccagc gtggcccaggcggcggacgtactgcggatcctctcgggaccttcctcgccgctcaagcag ctgttgatcgcggtggcacaggagaccgacctgcagcaggcacccgagtccgaaggcgtg gccaaggcgaccgacgagggtgtggaccagctcaagcagaaacttggctcgctgctcggc cagacccaggccggcaacgccgtggcggcggttacgcagatcgatccggtcagcgcgcac ttcgccgaactcaacagcctggtcagccaggacccgtcggcaccgatggccatcgatggc ctgctggcggacctcaacgagctctacgtgcaactcagcagcatggtcggcgccagcggc gaggcgctgctcggtgaagcgaagaatcaggccagtgcagccgccgcgcgggtcaacctg accgccgcgcgccagccgaagctggtccaggggctggtgggttcggtcgtcgcggccagc accaacagcatgatgggcggcgtgcgcaaccaactcaacgctgcctggcagagcgacgtg gtcaacgtctggcggcaatccctgagcggccgctacccaatggtgccgggcagccagcgc gacgccacgctggatgatttcggccagttcttcggtgttggcggggtgatggacaactac ttccgcaagtacctgcagccctacgtcgacacctcggcacgcaactggcgctggcagccg ggcgcggcgcagaagttgggcatctccgccggcgtgctgcagaccttccagcgcgcggcg ctgatccgcgacgagttcttccgcagcggcggcctgcagcccagcgtgcgcttcgacctc aagccggtaagcatggatgccaccatcagccagtcgcagctggatctcgacggccagctg atcggcttcgaccacggcccgagccggccggtggcggtgcaatggccgaaccccggcagc gtcggcgtggtacgcctcaccgtgtcgcccccggtcgaaggcggacgctcggccttgacc ctggagggcccgtgggcctggttccgcctgctcgatcagtccgaactgattggcggcgcc tcgccggatcgcttcaacctgcgcgtacgcctggatcgctccagcgttgcctacgaactg cgcgccagcagtgccttcaatcctttcaagagtcgtgcagtagccggcttcaccctaccg gagcggctgtga

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