Pseudarthrobacter sp. L1SW: KTR40_06975
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Entry
KTR40_06975 CDS
T10267
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psls Pseudarthrobacter sp. L1SW
Pathway
psls00300
Lysine biosynthesis
psls00470
D-Amino acid metabolism
psls01100
Metabolic pathways
psls01110
Biosynthesis of secondary metabolites
psls01120
Microbial metabolism in diverse environments
psls01230
Biosynthesis of amino acids
Module
psls_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psls00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KTR40_06975 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KTR40_06975 (dapF)
Enzymes [BR:
psls01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KTR40_06975 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF8121
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UEL29845
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All DBs
Position
1513481..1514425
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AA seq
314 aa
AA seq
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MDATLAKTTEPAFRTLSGLRFSKGHGTGNDFVLVADPEGVHTIAAQDVAALCDRHRGIGG
DGLIRAVPSRFLPEGRELLAAAPDAEWFMDYRNGDGTLSEMCGNGVRVFVHFLRAEGLID
LPDGGALTIGTRAGVKTVVRTGEDYAVDMGPWEFIFPGEATAKAMDSLVTAEGLEVPRPA
LSVSMGNPHTVVALAELSELAATRLFTAPVVDPVPAHGTNVEFVVPSEPLVHDGVGTVTM
RVHERGVGETQSCGTGACAAAVAIRHWAGAEAPDTWRVNVPGGVVGVKFFAGPAGHEHVE
LSGPAVIVATGTLS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaaccctcgcaaaaaccaccgagccggccttccgcaccctgagcggactccgc
ttttccaagggacacggcaccggcaacgactttgtcctggtggccgatcccgagggcgtc
cacaccatagccgcccaggacgtggcagccctgtgcgaccggcaccgcggcatcggcggg
gacgggctgatccgcgccgtcccgtcgcgcttcctgcccgagggccgcgagctgctcgcc
gccgccccggacgccgaatggttcatggactaccgcaacggtgacggcactttgtccgag
atgtgcggcaacggagtccgcgtctttgtccatttcctccgcgccgaggggctgattgac
ctgcccgacggcggcgccctcaccatcggcacgcgcgcgggcgtcaagaccgtggtacgc
acaggcgaagactacgccgtggacatggggccgtgggagttcattttccccggtgaagcc
acagccaaggcaatggattcactggttaccgctgagggcctggaagttccccgccctgca
ctctccgtcagcatgggcaacccccacaccgtcgttgccttggcggaactgtcggaactc
gcggcaacccgcctgttcacggcgcccgtggtggaccctgtcccggcccacgggaccaac
gttgagttcgtggttccgtcagagcccctggtgcacgacggcgtcgggacggtgaccatg
cgcgtgcatgaacgcggggtgggggagacccagtcgtgcggaaccggggcttgcgcagcg
gcagtggccatccgtcactgggcaggcgcggaagcccccgacacctggcgcgttaacgtt
ccaggcggcgtggttggcgtcaagttctttgccggcccggcgggccatgaacatgtcgag
ctgagtggcccggccgttattgtggcaaccgggacgctttcctga
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