Pseudarthrobacter sp. L1SW: KTR40_07185
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Entry
KTR40_07185 CDS
T10267
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psls Pseudarthrobacter sp. L1SW
Pathway
psls03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KTR40_07185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psls03000
]
KTR40_07185
03400 DNA repair and recombination proteins [BR:
psls03400
]
KTR40_07185
Enzymes [BR:
psls01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KTR40_07185
Transcription factors [BR:
psls03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KTR40_07185
DNA repair and recombination proteins [BR:
psls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KTR40_07185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UEL29885
LinkDB
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Position
complement(1558038..1559606)
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AA seq
522 aa
AA seq
DB search
MDFWQRYRAIDARDTRFDGQFYTAVRTTGIYCRPSCPARTPKAANVTFYETSAAAHDAGY
RACKRCLPEAVPGTPAWNLRQDIAGRAMRLINDGVINRDGVEGLAARLGYSSRQLNRILT
QELGAGPLSLARAGRAQTARTLLVSTTMKLADVAFAAGFSSVRQFNETMLEVFGMTPTAL
RAARQPKAPAGSTAITLRLPYREPFDPGIFTFLAVRALPGIEVGTTASYARTLRLPHGDA
RFRVDYDDGGPGRPLTLTIGAVDLRDLPALLSRVRRLFDLDADPVAIDNALAGDNRLTDA
VAGAPGIRMPGALDPAEMLVRAMVGQQVTVAAARTALTQLAAVGRPSQSPGEGLDRMFPT
AAEIAADGHALLRGPRKRTEALLAAASALAEGRLDFGYGDDPASLAAKLLPLAGVGPWTV
GYLTMRVLGAPDVFLANDAAVRNGIKALSGMAEAAANAGPGLPGAAGRTPDFREVSPWRS
YATMHLWRAAAPSTAGARPRAAALAAAGTSTARTSTAEKANR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggacttctggcagcgctaccgggcaatcgatgcccgggacacccggttcgacgggcag
ttctacactgccgtccggaccacgggcatctactgccgcccctcctgcccggccaggacc
cccaaagccgccaacgtcacgttctacgagacctccgccgcagcccacgacgccggctac
cgggcctgcaagcgctgccttccggaggcggttccggggacacccgcctggaacctgcgc
caggatattgccggacgcgccatgcggctcatcaacgacggcgtgatcaaccgggacggc
gtggagggcctcgcagcccgcctgggctattcgtcccgccagctcaaccgcatcctcacc
caggaactgggcgcggggccattgtcgctggcccgggcaggccgggcacagaccgcccgg
accctgctggtgtccaccaccatgaagctcgcggacgtcgcgttcgcggcgggcttcagc
agcgtacggcagttcaacgaaaccatgcttgaggtcttcggcatgacccccactgcgctg
cgggcggcccggcagccgaaggcccccgccgggtccacggccatcaccctccgcctcccc
taccgggaacctttcgaccccgggattttcacattcctggccgtgcgcgccctgcctgga
atcgaagttggaaccacggcgtcctacgcccgaacgctgcggcttccccacggagacgcg
cggttccgggtggattacgacgacggcgggcccgggcgaccgctgaccctcaccatcggc
gcggtggacctccgcgacctgccggccttgctgagccgcgtccggaggctgttcgacctg
gacgctgacccggttgccattgacaacgcgctggccggggacaaccggcttacggatgcg
gtggcaggtgcccccggaatcaggatgcccggagcgctggatcccgcggaaatgctggtc
cgggcgatggttgggcagcaggtgaccgtcgctgcggcgcggaccgcactcacccaactg
gccgccgtcggacgccccagccaaagccccggcgagggccttgaccgcatgttccccacg
gcagcggagatcgctgcagacggccacgccctcctgcgcggaccccggaagcgcaccgag
gcgctcctcgcagccgcttccgccctcgcggagggtaggctcgacttcggctacggcgac
gacccggccagcctggccgccaagctgctgcccctggcgggggttggaccgtggacggtg
ggctacctcaccatgcgggtgctcggcgccccggacgtattcctggccaacgacgcggcg
gtgcggaacgggatcaaggcactgagcggcatggcggaggccgcggcgaatgcgggacct
ggtctcccgggtgctgcgggccgaaccccggacttccgcgaggtcagcccgtggcgctcc
tatgccaccatgcacctgtggcgggcggcggccccgtccactgccggcgcgcgtccgcgg
gcggcggcgcttgccgcggcaggcaccagcacagcacgcaccagcaccgcagagaaagcg
aaccgatga
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