Pseudarthrobacter sp. L1SW: KTR40_07370
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Entry
KTR40_07370 CDS
T10267
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psls Pseudarthrobacter sp. L1SW
Pathway
psls03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KTR40_07370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psls03400
]
KTR40_07370
Enzymes [BR:
psls01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KTR40_07370
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KTR40_07370
DNA repair and recombination proteins [BR:
psls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KTR40_07370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Cys_rich_KTR
Ribosomal_S13
Zn_ribbon_8
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
UEL29914
LinkDB
All DBs
Position
complement(1605059..1605928)
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AA seq
289 aa
AA seq
DB search
MPELPEVAGLAGFLADHLQGAAVSKVQIVSFAVLKTADPPFSALEGRTVTGVRRFGKFIS
IDTGGISFVFHLARAGWVRFTDSPTDTQLKMGKGHIAARLAFTGPGGPRGLDLTEAGTKK
SLAVYVVRDPQDVPGIATLGPDPFADGFDADVLAEILAGSSQQIKGLLRSQSVIAGIGNA
YSDEILHAARISPFATAKSLDRGTVQVLYDAIHDVLGTALAEASGKPPKDLKDVKRSHMR
VHARTGQPCPVCGDTVREVSFADTALQYCPTCQTKGKILADRRTSKFLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaagtcgccggccttgccgggttcctggctgaccacctccaagga
gccgccgtctcaaaagtgcagatcgtctccttcgccgtgctcaagacggccgatcccccg
ttcagcgccctcgagggcaggaccgtcacgggtgttcggcgcttcggcaagttcatcagc
atcgacaccggcggcatttctttcgtctttcacctggccagggcgggctgggtccgcttc
acggactcccccaccgatacccagctgaaaatgggcaaggggcacatcgccgcccgcctt
gccttcaccggccccggcggaccccgcggtttggacctcaccgaggccggcaccaagaaa
agccttgcggtgtacgtggtgcgggacccgcaggacgtgcccggcatcgccaccctgggg
ccggaccccttcgctgacgggttcgacgccgacgtgctggctgagatccttgccggcagt
tcccagcagatcaagggcctcctgcgcagccagagcgtgatcgccggcatcggcaacgcc
tacagcgacgaaatcctgcatgcggcgcggatctcgcctttcgccacggcaaagtccctg
gaccgcggcacagtccaggtcctgtacgacgctattcatgacgtcctgggcactgcactg
gcggaggccagcggcaagccgccgaaggatctcaaggacgtgaaacggagccatatgcgc
gtccatgcccggaccgggcagccctgccccgtgtgcggggatactgtccgcgaggtttcc
tttgcggacaccgccctgcagtactgccccacctgccagaccaaggggaagatcctggca
gaccgcaggacctctaagttcctgaagtag
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