Pseudarthrobacter sp. L1SW: KTR40_07590
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Entry
KTR40_07590 CDS
T10267
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psls Pseudarthrobacter sp. L1SW
Pathway
psls03030
DNA replication
psls03430
Mismatch repair
psls03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psls00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KTR40_07590 (dnaE)
03430 Mismatch repair
KTR40_07590 (dnaE)
03440 Homologous recombination
KTR40_07590 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psls03032
]
KTR40_07590 (dnaE)
03400 DNA repair and recombination proteins [BR:
psls03400
]
KTR40_07590 (dnaE)
Enzymes [BR:
psls01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KTR40_07590 (dnaE)
DNA replication proteins [BR:
psls03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KTR40_07590 (dnaE)
DNA repair and recombination proteins [BR:
psls03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KTR40_07590 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UEL29956
LinkDB
All DBs
Position
1652701..1656258
Genome browser
AA seq
1185 aa
AA seq
DB search
MTSSNDSFVHLHNHTEYSMLDGAARLGELFDETERLGMPALATTDHGYLFGAFDFWKKAT
DKGIKPIIGVEAYVTPGTARGDKSRVRWGEEHQRKDDISGGGSYTHMTLLSYNNAGMRNL
FRASSIASLDAVFGKWPRLDRELLNTYSEGLIATTGCPSGEIQTRLRLGQYREALEAAAE
FRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKELNLPLVATNDLHYTHEHDAKAHEAL
LAIQSGSTLLEPTYDNGGSRFAFSGSGYYLKSPQEMRELFRDHPDACDNTLLIAERCEVS
FNTGANYMPRFPCPPGEDETSWLVKEVAKGLEYRYPGGVPDNVRAQADYELGVITSMGFP
GYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLRHGLIFERFLNPDRVS
MPDFDVDFDDRRRSEVIDYVTRKYGDERVAMIVTYGTIKTKQALKDSSRVLGYPFSMGET
LTKALPPAVMAKDIPLADIQNPEAKRYGEAGDFRQLISTDPEAAKVFETALGIEGLKRQW
GVHAAGVIMSSDPIIDVIPIMRRIQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDA
LENIKMNRGIDLDLENLELDDAPSYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDIS
AVLALYRPGPMGANAHTDYALRKNGIQEVIPIHPELKEPLSEILGGTYGLIVYQEQVMAV
AQKLAGYSLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMEAVKTLWDILLPFSD
YAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDDKDKSAIYLNECRRMGITVLP
PDVNESALNFTPVGNDIRFGMGAIRNVGVNVVEAMVAARESEGAFTSFKDYLMKVPAVVC
NKRTIESLIKSGAFDSLGHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFDEAESES
SLSIEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGLLSQHAEMSITSVLGEDGPQD
GAIITIAGMITSLSRRIAKASGNAYARAEVEDLGGSMEVMFFGQVYGPIASVLAEDLIVV
VKGRLQKRDDGAITLNCMELSVPDLSEGLNGPLVITMPTYKATEAVVTELGDVLRTHRGN
SEVRLHLQGDTRTEIMGLPVHLRVNPSPSLFGDLKVLLGPACLDA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccagcaacgactcgtttgtccatctccacaaccacaccgagtactcgatgctg
gacggtgccgccaggctcggcgagctgttcgatgaaacggagcggctgggcatgcctgcc
cttgccaccaccgaccacggctacctcttcggcgccttcgacttctggaagaaggccacg
gacaaagggatcaagccgatcatcggcgtcgaagcctatgtgactccgggaacagcccgc
ggtgacaagagccgcgtgcgctggggtgaggaacaccagcgcaaggacgatatttccggc
ggtggttcctacacccacatgaccctgctcagctacaacaacgcgggcatgcggaacctg
ttccgggcatcctccatcgcctcccttgatgcagtcttcggcaagtggccgcgcctggac
agggagctgctgaacacctattccgagggcctgatcgccaccacgggctgcccgtccggt
gaaatccagacccggctgcggctgggccagtaccgcgaggcgctggaggccgctgcggag
ttccgggacatcttcggggcggaaaactacttctgcgaactcatggaccacgggctggac
atcgagcggcgcgtcaccggggacctgctgcggctcgccaaggagctgaacctcccgttg
gtggccaccaacgacctccactacacccacgagcacgatgccaaggcccacgaggccctg
ctggccatccagtccggttcaaccctgctggaacccacctatgacaacggcgggtcccgc
ttcgccttctccggcagcggctactacctgaagtcgccccaggaaatgcgggaactgttc
cgcgaccaccccgacgcctgcgacaacaccctcctgatcgccgagcgctgcgaagtgtcc
ttcaacaccggggccaactacatgccgcggttcccctgcccgccgggggaggacgaaacc
tcctggctggtcaaggaagtggccaaggggctggaataccgttatccgggcggtgtcccc
gacaacgtccgcgcccaggccgactacgagctgggcgtcatcacttccatgggtttcccc
ggctacttcctggtggtggcggacttcatcaactgggccaagaacaacggcatccgggtt
ggccccggacgtggttccggcgccggctccatggtggcctacgccatgcgcatcaccgac
ctggacccgctgcgccacggtctgatctttgaacggttcctgaacccggaccgcgtctcc
atgcccgacttcgacgtcgacttcgatgaccggcgccgctccgaagtcatcgactacgtg
acccggaaatacggcgacgaacgcgtggccatgatcgtcacgtacggcaccatcaagacc
aagcaggcgctgaaggactcctcgcgcgtgctgggctacccgttcagcatgggtgaaacg
ctcaccaaggccctgcccccggccgtgatggccaaggacatcccgctggcggacatccaa
aacccggaggccaagcgctacggtgaagcgggcgatttccgccagctcatcagcacggac
ccggaggccgcgaaggtttttgagacggccctgggcatcgagggcctgaagcggcagtgg
ggtgtccacgcggccggcgtcatcatgtcctcggacccgatcatcgacgtcatccccatc
atgcgccggatccaggacggccaggtcattacccagttcgactaccccacgtgtgagggc
ctcggcctgatcaagatggacttcctgggcctgcggaacctgacgatcatttccgacgcc
ctggaaaacatcaagatgaaccgcggcatcgacctggacctggaaaacctggaactcgac
gacgccccgtcctacgagctgctggcccgcggcgacaccctgggcgtgttccagctcgat
ggcgggcccatgcggtccctgctcaagctgatgaagcctgacaacttcgaagacatttcc
gcagtgctcgccctgtaccggcccggtcccatgggcgccaacgcgcacacggactatgcg
ctgcgcaagaacgggatccaggaagtcatccccatccacccggaactgaaggaacccctt
tcggaaatcctcggcggaacctatggcctgatcgtgtaccaggaacaggttatggccgtg
gcgcagaagctggccgggtactcgctgggccaggcagacatcctccggcgcgccatgggc
aagaagaagaaatcggaactggacaagcagttcgcgggtttttcccagggcatgcaggac
aacggctactccatggaggccgtgaaaaccctgtgggacatcctgctccccttctccgac
tacgccttcaacaaggcgcactcggccgcctacggcgtgatctcctactggaccgcctac
ctgaaggcgcactacgccccggagtacatggccgcgctcctgacctccgtgggcgacgac
aaggacaagtcggccatctacctcaacgaatgccggcgcatgggcatcaccgtgctgccg
ccggacgtgaacgagtccgccctgaacttcactcccgtgggcaatgacatccgcttcggc
atgggtgccatccgcaacgtgggcgtcaacgtggtggaggccatggtggccgcccgggaa
agcgagggggcgttcacgtccttcaaggactacctgatgaaggtccccgccgtggtctgc
aacaagcggaccattgaatccctgatcaagtccggcgcctttgattccctgggccaccac
cgccgggccctggccatgatccacgaagaggcgatcgactccgtgatcacgctcaagcgg
aacgaggcgatcggacagttcgacctcttcgccggcttcgacgaagccgagtccgagtca
tccctgagcatcgaaatcccggacctgccggaatgggaaaagaaggacaaactctccttc
gaacgcgacatgctggggctctacgtttcggaccaccccctgcagggcctcgaagggctg
ctgagccagcatgcggagatgagcatcacgtccgtcctgggcgaagacggaccgcaggac
ggcgccatcatcaccattgccggaatgattacgtcgctgagcaggcgcattgcaaaggcc
agcggcaacgcgtacgcacgggccgaggtggaggacctgggcggctccatggaagtcatg
ttcttcggccaggtctacggccccatcgcttccgtgctggccgaggacctgatcgtggtg
gtcaagggacgcctgcaaaaacgcgacgacggtgccatcacactgaactgcatggagctg
tccgtccccgacctcagcgaggggctcaacggcccgctggtgatcaccatgcccacctac
aaggccacggaagcggtggtcaccgaacttggcgacgtcctccgtacccaccggggcaac
tccgaagtgcggctgcacctccaaggcgacacgcggacggaaatcatgggcctgccggtc
cacctgcgcgtgaaccccagcccgtccctgttcggcgacctgaaagtgctcctcggcccc
gcctgccttgacgcctga
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