Pseudarthrobacter sp. L1SW: KTR40_08680
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Entry
KTR40_08680 CDS
T10267
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
psls Pseudarthrobacter sp. L1SW
Brite
Enzymes [BR:
psls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KTR40_08680 (hrpB)
Messenger RNA biogenesis [BR:
psls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KTR40_08680 (hrpB)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UEL30142
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Position
1890261..1892897
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AA seq
878 aa
AA seq
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MTSPSGRKAPPAGIAFNLAAIGAGLPFADSLAALADALDCTGGTAVVQAPPGTGKTTLVP
PLLANHLSAGTTRPGRVVVTQPRRVAARAAARRLAALDGSRLGSRVGYTVRGERQAGPET
LIEFVTPGILLRRLLAAPDLPRARAVVLDEVHERGLETDLLFGMFAEVRQLRGDLAVVAM
SATLDAPRFAALLGDHDGGGPAPVIDCPSVLHSLDIKWRPAPVPRLDGRGVTPAFLEFVA
GTAAEAHRGALAANAATDALVFLPGAREVSQAAARLRSLLGHGIDVLELHGQAGAAEQDR
AVSGRQPGDNPRIIVSTDLAESSLTVPGVRLVVDSGLAREPRRDAGRGMNGLVTVSCSRA
SADQRAGRAARQGPGTVVRCYSQQAFGAAPAHVTPEINVADLTGPALLMACWGSPRGKGL
PLPDAPPEQAMDDAMEVLQELGAVSGNGQATAAGRTLSGIPADPRLGRALLDGAAAAGYR
AAAEVVAAVAGDARAPGADLVRLMSQLRADSGPAGRRWAEESRRLQALAEHAGPLSEAPA
LPALTGGTEVVGAVVALAFPDRVARRVPGDGPERYLLSSGTRAGLPAGSSLAGHEWLAVA
EVIRAEGRDSAGTGAVIRAAAPLSAGLAEAAAFHLLAEAVEATFTQGRVTARKVRRLGAI
SLASTPVRPSPAEGRAAVAAVLQKEGLAVLKWSTPAAALRCRLAFLHRELGRPWPDVSEA
GLLARLQDWLGPELEALAGGADADSVDLTEPLRRLLPWPEAARMDELAPEWLAVPSGSRV
PIGYPEPSSGTERPVVAVKLQECFGLAETPRLVHGRVPVLFHLLSPARRPLAVTDDLTSF
WSGPYAQVHAEMRGRYPKHPWPEDPWTAPATARTKPRK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacttctccgagcggccggaaggcgccgccagccggcatcgccttcaacctcgcggcc
atcggtgccggacttcccttcgctgactcactcgcggccttggctgacgccctggactgc
acgggagggactgcagtagtgcaggcaccgcccggaacaggcaagaccaccctggttccg
ccactcctcgcaaaccacctgtcggccggcaccacccggccgggccgggtggtggtcacg
cagccgcgccgcgtcgcggcccgggccgcagcccgccggcttgccgccctggacggcagc
cggttgggcagccgggtaggctacaccgtccgcggggaacgccaggcaggacctgaaacc
ctgatcgagttcgtcacccccggcatcctgctgcgccgcctgctggccgctccggacctt
cccagggcacgcgcggtggtcctggacgaggtccacgaacgggggctggaaaccgatctg
ctcttcggcatgttcgctgaagtccgccagctgcgcggggacctggccgtcgtcgcaatg
tccgcaaccctcgacgctcccaggtttgctgccctcctgggagaccacgacggcggcggg
ccggccccggtcatcgactgcccctccgtgctccattccctggacatcaagtggcggccg
gcacccgtgccgcggctggacggcaggggagtgacccccgcgttccttgaattcgtggcg
gggacggccgccgaagcacaccggggtgcgctggcagcaaacgccgccaccgatgccctc
gtcttcctccccggagccagggaagtttcccaggcggcggcacggctccgcagcctgctg
ggccacgggattgacgtgctggaactccacggccaggcaggggcagccgaacaggaccgc
gcggtgtccggccgccagcccggcgacaatcccaggatcattgtctccacagaccttgcc
gagtcctcgctgaccgtccccggcgtccggctggtggttgattcggggcttgcccgtgag
ccgcggcgtgacgccggccgggggatgaacgggctggtcacggtctcgtgttcccgcgcc
tcggcggaccagcgtgcagggcgggccgcccgccaggggcccggcaccgttgtgcgctgc
tacagccagcaggcctttggcgcagccccggcgcacgtgaccccggaaatcaatgtggcg
gacctgacgggtccggccctgttgatggcgtgctggggctccccgcgggggaagggcctc
ccgttgcctgatgcgccgccggagcaggccatggatgatgcgatggaagtcctgcaggaa
ctcggggccgtgtccggcaatggccaggccaccgccgcgggcaggacgctttccggcatt
cccgcagatccgcggctgggccgtgccctgctcgacggcgcggcggccgccggttacagg
gcggcggccgaggtggtggccgcggtggcaggtgacgcccgtgcgccgggcgcagacctg
gtgcggctcatgtcccaactgcgcgctgacagcggaccggccgggcggcgctgggcagag
gaaagccgtcgcctccaggctctggctgagcacgcaggcccgctgtccgaggctcccgcc
cttcctgccctcactggcggcactgaagtggtgggcgccgtcgtcgccctcgcttttccc
gacagggtggcacggagggttcccggcgacgggccggagcgctacctgctgtcatccggg
acccgggcagggctgccggccggcagcagcctggccgggcacgaatggctggccgttgcg
gaggtgatccgggccgaaggcagggactcagccggcaccggggccgtcatccgcgccgcg
gctccgctctccgcgggccttgccgaggccgccgcgttccaccttctggccgaagccgtc
gaggcgacgttcacgcagggccgcgtcaccgcccgcaaggtgcggcgattgggcgccatc
agtctcgcgtccacccccgtccgtccctcgcccgcggagggcagggcggcggtggcagca
gtgcttcaaaaggaaggccttgcggtcctcaaatggtcgacgccggcagccgccttgcgc
tgccggctcgccttcctgcaccgcgagctgggcaggccctggccggacgtctccgaggca
gggctccttgcccggctgcaggactggctcggaccagagcttgaggcgctggcagggggt
gcggacgccgacagcgtggacctcaccgagcctctccggcggctgcttccctggccagag
gcggcccggatggacgagctcgcaccggaatggctggccgtacccagcggctccagggtg
ccgatcgggtatccggaaccctcatcggggacggagcgtccggtggttgccgtcaaactc
caggaatgctttgggctggcagagactccccgcctggtccatggccgggtgccggtcctg
ttccacctgttgtccccggcccggcggccccttgccgtcaccgacgacctgacatccttc
tggtccggaccatacgcccaggtgcacgccgagatgaggggccgctatcccaagcatccc
tggccagaagatccttggaccgcgccggccaccgcacggaccaagccgcggaagtag
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