Pseudarthrobacter sp. L1SW: KTR40_13895
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Entry
KTR40_13895 CDS
T10267
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psls Pseudarthrobacter sp. L1SW
Brite
KEGG Orthology (KO) [BR:
psls00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psls03032
]
KTR40_13895
03400 DNA repair and recombination proteins [BR:
psls03400
]
KTR40_13895
Enzymes [BR:
psls01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KTR40_13895
DNA replication proteins [BR:
psls03032
]
Prokaryotic type
DNA Topoisomerases
KTR40_13895
DNA repair and recombination proteins [BR:
psls03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KTR40_13895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UEL27685
LinkDB
All DBs
Position
complement(3004738..3005736)
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AA seq
332 aa
AA seq
DB search
MRLRRSNASGRGYRRVAAGKGFSYRDLDGSTLPPGPVRDRLESIGIPPAWTDVWIAPFEN
GHIQATGVDGVGRRQYIYHPEWRERKDRVKFDRSLQLAESLPAARRRVTMDLRSEGFSRD
RVLAGAFRMLDSGSLRVGSERYTNENGSHGLATLLCAHVTVRKDRILLRFPAKSGKDWES
EIRDADLAALLRLLKRRGPNARLLAYKEGRQWKPVTSADINAYVKERTGSDFTAKDFRTL
RGTVAAAASLARTGAQRTAAKRKRAIARAMVEASEVLGNTPSIARKSYVDPRVLDHYHEG
ETIDPKRPDSAEAELRALLYREGDVVPLAKSG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccgccgcagcaatgcctcgggccgcggctaccgccgtgttgctgccggtaaa
ggcttcagctaccgggacctggacggctccaccttgccgcccggcccggtccgggaccgg
ctggaaagcatcggcattccgccggcgtggaccgacgtttggattgccccgttcgagaac
gggcacatccaggcaacaggcgtggatggggttggccggcgccagtacatctaccacccg
gaatggcgggaacggaaggaccgggtgaaatttgaccggtccctgcagctggcggagtcg
ctgccggcggcccgccgcagggtcaccatggacctgcgcagtgagggtttttcgcgtgac
cgggtcctggccggggccttccggatgcttgacagcgggtcgctgcgcgtggggtcggag
cggtacacgaacgagaacggcagccacggactggccaccctgctctgcgcccatgtcacg
gtgcgcaaggaccgcatcctcctgaggttcccagccaagagcggcaaggactgggagtcg
gaaatccgcgacgccgacctcgccgccctgctgcggctgctcaagcggcgcggccccaac
gcccggctcctggcgtacaaggaagggcggcagtggaagcccgtcaccagtgccgacatc
aacgcctacgtgaaggaacggaccgggtccgacttcacggccaaggacttccggaccctg
cggggcacggttgcggcggcggccagcctggcccgcacgggcgcccagcggacggcggcc
aagcgcaagagggccatcgcccgggccatggtggaggcgtccgaggtgctggggaacacg
ccgtcgatcgcgcgtaagagctacgtggatccgcgcgtgctggaccactaccacgagggc
gaaaccattgatcccaaacggcccgattcggccgaggccgagctaagggccctgctgtac
cgcgagggtgacgtggttccgctggcgaaaagcggctga
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