Pseudomonas sp. Lz4W: B195_003215
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Entry
B195_003215 CDS
T11612
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pslz Pseudomonas sp. Lz4W
Pathway
pslz03030
DNA replication
pslz03430
Mismatch repair
pslz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pslz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B195_003215
03430 Mismatch repair
B195_003215
03440 Homologous recombination
B195_003215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pslz03032
]
B195_003215
03400 DNA repair and recombination proteins [BR:
pslz03400
]
B195_003215
Enzymes [BR:
pslz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B195_003215
DNA replication proteins [BR:
pslz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B195_003215
DNA repair and recombination proteins [BR:
pslz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B195_003215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF1059
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AUB73877
LinkDB
All DBs
Position
675325..675936
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPGFIEQLTGIS
NAMLRTAPSAQQVMNEVNEFVGTTPLLAHNAAFDQKFWDFEMGLIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLTTHLAEQLRQKHGLRELSHD
LLRSLQKIPAAKINEHLKRCRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatcgccgtaattgactttgaaaccacaggtatctccccgagcagcagctgc
cgggcgaccgaaattgcggtggtgattcttgaacaggggcgcattgtcgagcgttaccag
agcctgatgaacgcgggtgtgcgggtgccgggcttcatcgagcaactgaccggcatcagc
aacgccatgttgcgcacggcgccatctgcgcagcaggtgatgaacgaggtcaacgagttc
gtcggcaccacgcctttgctggcccacaacgccgcgttcgaccaaaaattctgggatttc
gagatggggctcatcaagcgcacccgcttgcagaactttgcctgctcgttgctgctggcc
cggcgtttgatgccggcggcgcccaatcacaagctgggtaccctcaccaccttcgcccag
ttgccccataccggccaggctcaccgggccatggccgatgccgaaatggcagccaacctc
acgacccatctggctgagcaactgcgtcaaaagcacggcctgcgagagttgagccacgat
ctgttgcgcagcctgcaaaaaattcctgccgccaaaatcaacgaacacctcaagcgctgt
cgcgggttctga
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