Pseudomonas sp. Lz4W: B195_017380
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Entry
B195_017380 CDS
T11612
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pslz Pseudomonas sp. Lz4W
Pathway
pslz03030
DNA replication
pslz03430
Mismatch repair
pslz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pslz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B195_017380
03430 Mismatch repair
B195_017380
03440 Homologous recombination
B195_017380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pslz03032
]
B195_017380
03400 DNA repair and recombination proteins [BR:
pslz03400
]
B195_017380
Enzymes [BR:
pslz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B195_017380
DNA replication proteins [BR:
pslz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B195_017380
DNA repair and recombination proteins [BR:
pslz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B195_017380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AUB76538
LinkDB
All DBs
Position
complement(3855655..3859176)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLIKTLAGMNMPAVAVTDQNNMCSLVKFYKAAMGGG
IKPICGADLWLSNKDPENPVSRLSLLAMNGVGYRNLTELISRGFIDGQRNGQVIIEREWV
AEAAEGLIMLSSAKEGEIGIALISGNTEEAEVLAREWMTVFPDRFYLEVQRTKRPNDEEH
LHAAVALAETVGAPLVATNDVRFIRQEDFEAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDLPEALVNSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EDRLSVLLPKDTTEDYDARRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV
TQFDKDDVESAGLVKFDFLGLRTLTVIDWALKTINRDRAKVDEPPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNNIDGDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEIRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFTDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPFFHDEP
KAWQASIDQNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEADADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTSLAESLRLKVVQSALKGDQLRWLGDLFKKHRGACPITMEYTGVGAKAT
LQFGETWRIDPADSLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctgcgcctgcacactgaatactccctggtcgatggcctg
gtgcggatcaaaccgctgatcaaaaccctggccgggatgaatatgcccgccgtggcggtg
accgaccagaacaacatgtgttctttggtcaaattctataaagcggccatgggcggcggg
atcaagccgatttgcggggctgacctgtggttgtcgaacaaagacccggaaaacccggtg
agtcgccttagcctgttggcgatgaatggcgtcggctaccgcaatctgactgaactgatc
tcccgtggctttattgatggccagcgtaacggccaggtcattatcgagcgcgaatgggta
gccgaggctgctgaaggcctgatcatgctttcgtcagccaaggagggtgaaatcggcatc
gcgctgatcagtggcaacactgaagaggccgaggttctggcccgcgaatggatgaccgta
ttcccggaccggttctatctcgaggttcaacgcaccaaacgtcccaatgacgaagagcac
ctgcatgcagcggtagcgctggcagagacagtcggcgcgccactggtggcgaccaacgat
gtgcgcttcatcaggcaagaagacttcgaagcccatgaaacccgtgtctgcatcggtgaa
ggccgggcgctggacgacccgcgccgctcgaaaaactacagcgaccagcagtacctgaaa
agcgccgaagaaatggccgagctgttcagtgatttgccagaggcgctggtgaactcggtt
gaaatcgccaagcgctgcaacatcgaagtaaaactgggcaaacactttttgcccaacttc
ccgattcccgatggcatgaccatcgatgagtatttccgcaaggtgtcctttgacggtctg
gaagatcgcctcagcgttctgctgcctaaagacaccaccgaagactatgacgccaggcgc
caggtgtatgtcgaccggctgaatttcgaactggatatcatcatccagatggggttcccc
ggttacttcctgatcgtaatggactttatccagtgggctaaaagcaacggcgtacccgtt
ggcccgggtcgagggtcgggtgccgggtcgctggtggcctatgtgcagaagatcaccgac
cttgatccgctggaatacgacctgctgttcgaacgattccttaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgagaccgggtcattgagtatgta
gccgaaaagtatggtcgcaacgcggtaagccagatcattacctttggttcgatggctgcc
aaggcggtaatccgtgacgtggcccgggtccagggcaagtcctacggcctggcggaccgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgtgacttcatcaaggtcgatgaagaagcggccgagatctgggacatggcc
cgcaagctcgagggcgtagtccgtaacgttggcaagcacgcgggtggcgttgtaatcgcg
ccgaccaaacttaccgacttttcgccgatttactgcgacgaagagggcggcggcctggta
acccagttcgacaaggacgacgttgagtcggccggtctggtgaagttcgacttcctgggg
ctacggaccctgacagtcatcgactgggcgctgaaaaccatcaaccgtgatcgcgccaag
gtagacgagccgcctctggatatcgccttcattccgctggatgacaagccgacctatcag
ttgctgcaaaaggccgaaaccactgcagtgttccagcttgagtcgcggggcatgaaggag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggccctgttc
cgtccggggccgctgcagtcaggcatggttgatgactttatcaaccgtaaacacggtcgt
gccgaactggcgtacccgcactcggactaccagtacgaagggctaaagccggtattggcc
ccgacatacggcatcattctgtatcaagaacaggtgatgcagattgcccaggtcatggcc
ggctacaccctgggtggtgccgacatgttgcgccgggccatgggcaagaaaaagcccgaa
gaaatggccaagcagcgcggcggctttatcgagggttgtgccaacaacaatatcgatggc
gaccttgccggtaacattttcgacctggtagagaaatttgccggttatggctttaacaaa
tcccactctgccgcctacggtctggtgtcgtaccagacggcatggctgaaaacccattac
ccggcgccgttcatggctgcggtactgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaaattcgcaccatgaagctgcgtctcgacgcgccggatgtgaatgct
tcggagttcaagttcacggttaacgatgaagggcggatcatttacggtctgggtgcgatc
aagggcgtaggcgaggggccagtagaggccatcaccgaagctcgccaggacggtccattc
accgatttgttcgatttctgcgcccgggtcgacctcaaacgcatcaacaagcgaaccctg
gatggtctgatccgtagcggtgcgctggaccgtctggggccgtttttccatgatgaaccc
aaggcctggcaggcgagtatcgaccagaatcgcgcggtattgctggctgcgatggaagag
gcgatcaaggctgccgaacaaaccgcccgcacccacgacagcgggcatgccgacctgttt
ggcggcctgtttgtcgaggcggatgccgacgtctacgccaatcaccgcaaggccaaggag
ctgacgctcaaagagcgtttgaagggcgaaaaagacaccctgggcctgtacctgaccggc
catccgattgacgagtatgaaggcgagatccgccgttttgcccgtcagcggatcattgat
ctcaagccggcccgggatactcaaacggttgccggcatgatcatcgctttgcgggtcatg
aagaacaaaaaaggcgacaagatgggcttcatcaccctcgacgaccggtcgggacggatt
gaagcctcgctgtttgccgaggcattccattcggcgcaatcgctgttgcagacggatgcg
atggtggtggtcgaaggtgaggtcagcaatgacgacttctccggcggcctgcgcctgcgg
gtcaagcgtgtgatgagcatggaagacgcccgaaccagcctggccgaaagcctgcgtctg
aaagttgtacagtccgcgctcaaaggtgatcaactgcgctggctgggcgatttgttcaag
aaacaccgcggcgcatgcccgatcaccatggaatacaccggagtgggggccaaggcgacg
ctgcagtttggcgagacctggagaatcgatccggctgacagcttgattcaagccttgcgt
gaccagtttgggcgagacaacgtcttcctccaataccgttga
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