Pseudomonas sp. Lz4W: B195_021080
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Entry
B195_021080 CDS
T11612
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pslz Pseudomonas sp. Lz4W
Brite
KEGG Orthology (KO) [BR:
pslz00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
B195_021080
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
S1_RRP5
HHH_7
OB_PDCD11
T2SSK
DUF22
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AUB77240
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Position
4706845..4709169
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFISRYRKEVTGSLDDTQLRHLEERLRY
LRELDERRISILASIEEQGKLTPELARDIKLAETKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPTQTPEIEAARFVDAEKGVADVKAALDGAKYILMERFAEDASLLDKLRS
FLKQEAILSARVIPGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSSLKVG
EELPGTMHPGEMMISERFGLQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKIAVVDATGKMLEYATVYPHVPHN
KWDQTIAVMAALCAKHSVELIAIGNGTASRESDKLVIDLIKKYPALKVTKVMVSEAGASV
YSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVSHRDENGAFKTRAALKKVSRL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVKRIASDTERDIRSLIGDASFLKRLDP
KKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEIDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSAPRQQNTAPRKETVAAAPANNAMASLFANAKQLKKRP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaagaacttggcgtgcgcccgcagcaggtcgaa
gcggccgtcgcgcttctggatgaaggctccaccgtacccttcatttcccgctaccgtaag
gaagtgaccggcagcctggatgacacccagttacgtcatctggaagaacgcctgcgctac
ctgcgtgaactcgacgaacggcgtatcagcatcctcgccagcatcgaagaacaaggcaaa
ttaaccccggaactggcccgcgacatcaaactcgccgagaccaagacccgccttgaagac
ctgtacctgccgtacaaacagaagcgccgcaccaagggtcagatcgccctggaagcgggc
ctgggtgaactggcagacggcctgttcaacgacccgacacaaacccctgaaatcgaagca
gcacgttttgtcgatgctgaaaaaggcgtggcagacgtcaaggcagcactcgacggcgcc
aagtacatcctcatggagcgcttcgccgaagacgccagcctgctggataaactgcgcagt
ttcctgaaacaggaagcgatcctcagcgcccgggtgattcccggcaaagaagaggaaggc
gccaagttccgcgattacttcgaacacgacgagccgctcaaaagcatgccgtcgcaccgc
gcgctggcgattttccgtggccgcaacgaaggcattctcagctcctcgcttaaagtcggc
gaagagctgccgggcaccatgcaccccggcgaaatgatgatcagcgagcgtttcggcctg
caaaaccagaaccgcccggctgacaaatggctgggcgaagtggtgcgctggacctggaag
gtcaagctttacacccaccttgaaaccgacttgctgggtgagttgcgcgacggggcagaa
accgaagccatcaacgtgttcgcccacaacctgcatgacttgctgctggccgcacctgcc
ggcccgcgcgcaaccctgggtctggacccgggcctgcgtaccggctgcaagattgccgtg
gtcgatgccaccggcaaaatgctcgaatacgccaccgtgtacccgcacgtgccgcacaac
aagtgggatcaaaccatcgccgtcatggccgccctgtgcgccaagcactcggtcgaactg
atcgccatcggtaacggtaccgccagccgcgaaagcgacaagctggtgattgacctgatc
aaaaaatacccggccctgaaagtcaccaaagtgatggtgtctgaagccggtgcttcggtg
tactcggcgtcagaactggccgccaaggaattccccgacctcgacgtatcgatccgtggc
gcggtgtcgattgcccgccgcctgcaggatccgctggcagagctggtgaaaatcgatcct
aaatccatcggtgtcggccagtaccagcacgacgtatcccagctcaagctggcacgcggc
ctggacgccgtggttgaagactgcgtaaacgccgtgggcgttgacgtgaacaccgcatcg
gtggcgctgctggcccgcatctcggggctcaatgccacactggcgcaaaacatcgtcagc
catcgcgatgaaaacggcgcgttcaaaacccgcgcggcactgaaaaaagtcagccgtctg
ggcgaaaaaaccttcgaacaggctgccggtttcctgcgggtaatgaatggcgacaacccg
ctggacgcttctgcggttcaccccgaggcctacccgctggtcaagcgcattgcctcggac
accgagcgcgacattcgctcgctgatcggcgacgcgagctttctcaagcgtcttgatccg
aagaaattcactgacgaaaccttcggcctgccgacggtcaccgacattctccaggagctg
gagaaacctggccgcgatccgcgtcccgagttcaagactgccgagttccaggaaggcgtc
gaagacctcaaggacctgcaactggggatgattctggaaggcgtggtgaccaacgtgacc
aacttcggtgccttcgtcgatatcggcgtccatcaggacggcctggtgcatatttcggcc
ctgtccgagaaattcatcaaggacccgcgtgaagccgtaaaagccggtgacgtggtcaag
gtcaaggtcatggaaatcgacattccacgtaaacgcgtgggtctgtcgatgcgcatgagc
gacacccccggcgagaagatcgacggggctcgtggcgcgcgtccgggttcggcaccgcgc
cagcaaaacactgcgccgcgtaaggaaaccgtggctgcggccccggccaataacgcgatg
gcatcgctgtttgccaacgccaaacagttgaaaaaacgcccatga
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