Pseudoalteromonas sp. SM9913: PSM_A0268
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Entry
PSM_A0268 CDS
T01374
Symbol
polA
Name
(GenBank) multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm03030
DNA replication
psm03410
Base excision repair
psm03420
Nucleotide excision repair
psm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSM_A0268 (polA)
03410 Base excision repair
PSM_A0268 (polA)
03420 Nucleotide excision repair
PSM_A0268 (polA)
03440 Homologous recombination
PSM_A0268 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psm03032
]
PSM_A0268 (polA)
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A0268 (polA)
Enzymes [BR:
psm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSM_A0268 (polA)
DNA replication proteins [BR:
psm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSM_A0268 (polA)
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSM_A0268 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSM_A0268 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ADT67222
LinkDB
All DBs
Position
I:294356..297091
Genome browser
AA seq
911 aa
AA seq
DB search
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVVNMLKSLIKQYDPSHMVV
VFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPLHSIIKAMGFPLISIEGVEADDVIGT
FARIASEQQRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPETVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLQKYGSLQGVIDNASDIKGKIGEKLAKAIDHLPLSY
ELATIKCDVEVESDLDTFKLQTPNKDELIALYGECEFRRWLAELLDNPKDADTHLAVPTQ
ENELPKVEDAHYETILTEAQFETLIEQLNEAELFAFDTETTSLEYMKAQLVGMSFAVKAG
EAAYLPIAHDYPGAPEQLSLEFVMQKLGPILADENKAKVGQNLKYDKSVLANAGYELNGI
KFDTMLESYVFNSVGTRHDMDSLALKYLGHKNISFEDIAGKGKKQLTFNQIELEKAAPYA
AEDADITLRLHQVLWPKLEADEKLKSVFEDIEMPLVSVISDIERTGVAIDSNMLATHSQR
LGERLLELEKEAFEIAGEPFNLSSPKQLQVLLFEKLELPVIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLIVNERTQRVHTSYHQAVTATGRLSSSDPNLQN
IPIRSEEGRRIREAFIAADGYKIVAADYSQIELRIMAHLSQDKGLLSAFANGLDVHSATA
AEVFGVELEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAENGYVETIFGRRLHLPEINARNGARRKGAERAAINAPMQGTAADIIKK
AMLSVHAWVNQQAPNTVKLLMQVHDELVFEIKTECTEQYTKQICELMSQAAQLDVPLIVE
ADEGDNWEQAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccccgaaaacccgcttattttagttgatggctcttcatatttgtttcgt
gcttatcattcaccaccacatctaaccaactctaagggtgaggccaccggtgccatttat
ggcgtggtaaacatgcttaaaagtttaatcaaacaatatgatccctcacatatggtggtg
gtatttgacgccaaaggtaaaaccttcagaaatgatatgtacagtgagtataaagcgaac
cgtccgccaatgcctgatgatctgcgtactcaaatagcgccgctgcacagtattatcaaa
gcaatgggttttccgttaattagtattgagggcgtggaagccgatgacgtaatcggtact
tttgcacggattgcctctgagcaacaacgtcatgtgctggtatcgactggtgataaagat
atggcgcagttggtcaatgagcatgtaaccttgattaataccatgaccgacagcatttca
gatcccgaaactgtggttgaaaagtttggtgttggacctgaacttattatcgactattta
gctttaatgggcgacaaagtagataatattcctggcgttgagggttgtggacctaaaaca
gcggttaaatggttacaaaagtacggatcgcttcagggcgtaattgataatgcttctgat
ataaaaggtaaaataggcgagaaactggcaaaagcgattgatcatttaccgttaagctat
gagcttgccactattaaatgtgatgttgaggttgaatctgatcttgatacttttaaatta
caaacaccgaataaagacgaattaattgccttatacggtgaatgtgagtttcgtcgttgg
ctagctgaattgctagacaacccaaaagatgccgacacacatttagcagtcccaacgcaa
gagaatgagctgccaaaagttgaagatgcgcactatgaaactattttaactgaggcccaa
tttgagacattaatagaacagcttaatgaagctgagctatttgcttttgatacagaaaca
accagtttagagtatatgaaagcgcaattggtcggtatgagctttgcggttaaagcaggg
gaagcggcttatttaccaatagcacacgattaccccggtgcgcccgagcagttaagcctt
gaatttgtgatgcaaaagttggggccgatattagcagacgaaaataaagctaaagtaggt
caaaatctaaaatacgataaaagcgtgcttgccaatgcaggctatgaattaaatggtatt
aagttcgacactatgttggagtcttatgtatttaatagcgtaggcacccgtcatgatatg
gactcgttggcgcttaaatatttaggccacaaaaatattagctttgaagatattgcaggt
aaaggtaaaaagcagcttacatttaatcaaatagaacttgaaaaagcagcgccttatgcc
gctgaagatgccgatattactttgcgtttgcaccaagtgttatggccgaaacttgaagcg
gatgaaaaactaaaatcggtgtttgaagatatagaaatgccactagtaagtgttatttct
gatattgagcgcaccggtgttgctatcgacagcaacatgttggccacgcatagccaacgt
ttaggtgagcgattacttgagcttgaaaaagaagcgtttgaaatcgcgggcgaaccgttt
aacttaagctcaccaaagcaactacaggtgctgttatttgaaaagctcgaattgcccgtt
atcaaaaaaacacctaaaggcgcgccctctacagcagaagaagtactacaagagttagcg
catgattacccattgcctaaagtgattattgagcatcgtggtttatctaagctcaaatca
acctacaccgataagttacccttgatagtcaatgaacgcacgcagcgagtgcatacttct
tatcaccaagcggtaacagcaacaggtcgattaagctcaagcgatcctaatttacaaaat
attcctattcgttcagaggaagggcgtcgtattcgtgaagcgtttattgccgcagatggg
tataaaattgtggctgccgattacagccaaatagaactgcgtattatggcgcatctctcg
caagataagggattactaagcgcatttgctaatggcttagatgttcacagtgccacggct
gctgaagtatttggggttgagcttgaagaggtaacatcagatatgcgccgtaaagctaaa
gcggtaaactttggcttaatttatggcatgtcagcatttggcttagcacgtcaacttgat
gtaccacgccatgaagcgcagcattatattgataaatattttgagcgttttccaggtgtt
ttagaatacatggaaacaacgcgtgagaaagcggccgaaaatggctatgtagaaacaatt
tttggccgtcgcttacatttaccagaaataaatgcgcgcaatggcgctcgtcgcaaaggc
gctgagcgcgcagcaattaatgcaccgatgcaaggcactgcggctgatattattaaaaaa
gcgatgttaagcgtgcatgcttgggttaatcagcaagcacctaatacagttaagctgctc
atgcaggtacacgatgaattggtatttgagattaaaacagaatgtactgagcaatatacc
aaacagatttgtgagctgatgtcacaagcggcgcagttagatgtaccacttattgttgaa
gctgacgaaggtgataactgggaacaagcacactaa
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