Pseudoalteromonas sp. SM9913: PSM_A0326
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Entry
PSM_A0326 CDS
T01374
Name
(GenBank) EAL domain-containing protein
KO
K18765
RNase E specificity factor CsrD
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psm03019
]
PSM_A0326
Messenger RNA biogenesis [BR:
psm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSM_A0326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
Motif
Other DBs
NCBI-ProteinID:
ADT67280
LinkDB
All DBs
Position
I:361590..363236
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AA seq
548 aa
AA seq
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MKVSKFHFTNYSNALFYALCIALLVIINSGLSLVLQHQNEQVGLKLAKQLQQPLANEKQL
IANTPFTLAPNKNSIYIEKQKHYFSANSKGILLYSWPVWYSYSYLFLIINAVLLLAMLCI
RRFKKPKTIKNSTMTSKRQQHFNNKKVRYAPKVSSLQLAPIATTNVQEAIKYNVFALIQC
ECHFDANTDLQATLKVLLAKDFINTTEISVKLLTAGNFAFTLKGIDAIDKLNCAKYLHQC
IVSAAHVLAPRTAQRHVKVGLCTYYSEADQVMVYQLAKSALTLSQQNRVKHYHQLALNYG
HVQKLDRHSISQRIKKQKLAILFQPVYELDSGAIIKHYVSIKSNDRGNKQLLNQESISQF
YSEGEALLHDQAVVMQVKKLLLIDKSSSVISIKLHPKNWFNNEFWSWLTAYINDLKNQHT
LQFSINESEFLNNQLRLQGAFAAIAALNCNIVINDVRNSKNIFKFTLNKQISGLNLASEL
VHGIERSNSQQKYVRGIVHISRLLSLSVFALDVETPQELQLLKVIGISGAQGGYFSKLLP
NYTQVAFH
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagtaaatttcactttaccaattattcaaatgctttgttttatgctctgtgt
atcgccttgctagtgattattaatagcggtttaagtttggttttacagcatcaaaacgag
caagttggtttaaagctagcgaagcaattgcaacagccattggccaatgaaaaacaactt
attgcaaatacgccttttacgctcgcgcctaataaaaactctatttatatagaaaaacaa
aaacattattttagcgctaactcaaaaggaattttgctctactcatggccagtttggtat
agctatagctatttgtttttaataataaacgcggttcttttgctcgctatgctttgtatt
cgacgttttaaaaagcctaaaacaataaaaaacagcacaatgacctctaaacgtcagcag
cactttaataataagaaagtacgttatgcacccaaagtgagttctttacagctcgctccc
atagcgacaactaatgtgcaggaagcaattaaatataatgtatttgcacttattcagtgt
gaatgccattttgatgcaaacactgacttacaagcgactcttaaagtcttattggcaaaa
gactttattaatacgactgaaatatccgttaagttattaactgcaggcaatttcgctttt
actctcaaagggattgatgcaattgataaactcaattgcgctaaatatttacatcaatgc
attgtaagtgccgctcatgtattggcgccaagaactgcacagaggcatgtaaaagtaggt
ttatgtacttattattccgaggctgatcaggttatggtgtatcagttggcaaagtcggca
cttactctctcgcagcaaaatcgagttaagcattatcaccaattagcgttaaattatggt
catgtccaaaagctcgatagacactcaatatcacaacgaattaaaaagcaaaaattagct
attttatttcaaccagtatacgagctcgatagcggcgctattattaagcattacgtatca
attaaaagtaatgacaggggaaataaacaattacttaatcaagaaagtatcagtcaattt
tatagcgaaggtgaggcgctgttgcacgatcaagcggtagttatgcaagttaaaaaacta
ttgcttatagataaatcatcgtcagttattagtattaagttacatcctaaaaactggttt
aataacgagttttggagctggttaactgcttatatcaatgacttaaaaaaccaacataca
ctgcaattttctataaatgaatcagaattcttaaataatcaattacgtttgcaaggcgct
tttgcagcaatagcggcactaaactgcaatattgtaattaatgatgtgagaaacagtaaa
aatatttttaagtttacgcttaataaacaaatatcagggcttaacttagcttctgaactt
gtccatgggatagagcgcagtaattcacaacaaaaatacgttagggggattgtgcatata
agtagattattgagcttgtcagtctttgcacttgatgtagagacgcctcaggagctacaa
cttttaaaagtaataggcattagcggcgcgcaaggaggatatttttctaaattactcccc
aattatactcaagtcgcatttcactaa
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