Pseudoalteromonas sp. SM9913: PSM_A0541
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Entry
PSM_A0541 CDS
T01374
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm00260
Glycine, serine and threonine metabolism
psm00630
Glyoxylate and dicarboxylate metabolism
psm00670
One carbon pool by folate
psm00785
Lipoic acid metabolism
psm01100
Metabolic pathways
psm01110
Biosynthesis of secondary metabolites
psm01200
Carbon metabolism
Module
psm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSM_A0541 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSM_A0541 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PSM_A0541 (gcvP)
00670 One carbon pool by folate
PSM_A0541 (gcvP)
Enzymes [BR:
psm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PSM_A0541 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Pyridoxal_deC
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ADT67493
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Position
I:571155..574046
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AA seq
963 aa
AA seq
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MSNAKSLEQLEQKQDFIRRHIGPSPAQVNDMLSALEVSSVEELIGQTVPAGIRLEQGLNI
GESRTEVETLSYLKSVASKNKVFKSYIGQGYHPTHVPHVILRNVLENPGWYTAYTPYQPE
IAQGRLESLLNFQTMTLDITGLDLASASLLDESTAAAEAMGLAKRVSKAKKANAFFIADD
VHTQTIGVVSTRAEQFGFEIIVGKAADAVNHDIFGALFQYPSTSGEIVDITDLIAGVQSK
KAIACVAADIMSLLLLKAPGKLGADVVLGSAQRFGVPMGYGGPHAAFFATRDAYKRSLPG
RIIGVSKDRLGNDALRMAMQTREQHIRRDKANSNICTAQVLLANMAAFYAVYHGPQGLKT
IAQRIHRFADILATGLKAKGVALKHTTWFDTLTVVDENKADVIARAVAKGVNFAANHAGE
YSISVSETTIRADIAELFDIILGEGHGLSVDAIAADVEANGSDSIPASLVRDDEILTHPN
FNSYHSETDMLRYIKRLENKDLALNHSMISLGSCTMKLNATAEMIPITWPEFANLHPFCP
LDQAEGYQIMINELHDWLVNITGYDAVSLQPNSGAQGEYAGLIAIRKYHESRGDAHRNVC
LIPSSAHGTNPASAQMASMKIVVVNCDKNGNIDMEDLKAKAEEVSENLSCAMVTYPSTHG
VYEETIRELCEIVHQHGGQVYMDGANMNAQVGVTSPGFIGSDVSHLNLHKTFCIPHGGGG
PGVGPIGVKSHLAPFMPNHSVINVPGTNEGNGAVSAAPYGSAAILPISWAYIAMMGSEGL
KQATEMAIVNANYLSNELSKHFPILYRGRNNRVAHECIIDLRPLKEASGITEMDVAKRLQ
DYGFHSPTMSFPVAGTLMIEPTESESKGEIDRFIEAMVSIKGEIDKIISGEWSIENNPLV
FAPHTQADVLGNEWDRAYDRFYAAFPVPAVAKDKFWPTVTRIDDVYGDRNLVCSCPAVET
YRD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgccaaatctcttgaacaattagagcaaaagcaagattttattcgccgccat
attgggccaagcccagcgcaagtaaacgacatgcttagcgctcttgaagtatcgagcgtt
gaagagctgatcggtcaaactgtacctgctggtattcgtcttgagcaaggtcttaatatc
ggcgaaagccgtaccgaagttgaaacactaagctacttaaaatcagtagcaagcaaaaat
aaagttttcaaatcgtatattggccaaggctaccacccaactcacgtaccgcacgtaatt
ttacgtaacgtacttgaaaacccgggttggtacacagcgtacacaccgtatcagccagag
attgcacaagggcgtttagagtcactattaaatttccagactatgaccttagacattacc
ggcctagatttagcaagtgcttcactgcttgacgaatcaactgctgcagccgaggcaatg
ggccttgcaaaacgtgtatctaaagctaaaaaagccaatgcgttctttattgccgacgac
gtacacacgcaaaccattggcgtagtgagcacccgtgcagagcaatttggttttgaaatt
attgtaggtaaagccgctgatgccgtgaaccacgacatttttggtgcgttatttcaatac
ccgtcaacatcaggcgaaattgttgatataactgacctaattgctggcgtacaaagcaaa
aaagcgattgcctgtgtggcagccgatatcatgagcttattactgttaaaagcaccaggt
aaattaggtgcagatgtagtacttggctctgctcagcgttttggtgtgccaatgggttac
ggtggtccacatgctgcattttttgcaacacgtgatgcatacaaacgttcattaccaggg
cgtattattggtgtatcaaaagaccgtttaggtaacgatgcactgcgtatggcaatgcaa
acccgtgagcaacacattcgtcgcgacaaagccaactcaaacatttgtactgcgcaagta
ttactagcgaacatggcggcgttttacgcggtataccatggcccgcaaggcttaaaaacc
attgcacaacgcattcaccgttttgctgatattttagcaactggcttaaaagcaaaaggc
gtggcacttaagcacactacctggtttgatacattaactgttgttgatgaaaacaaagct
gacgtgattgcccgtgctgtggctaaaggtgttaactttgctgctaaccatgcaggcgag
tactcaatttcagtatcagaaaccacaatacgtgcagacattgccgagttatttgatatt
attttaggcgaaggccacggcctaagcgtagatgcaattgctgcggatgttgaagcaaat
ggcagtgactctattcctgcaagcctagtgcgtgatgatgaaattctaacgcatccaaac
tttaacagctaccacagcgaaacagacatgcttcgctatattaagcgacttgaaaacaaa
gatttagcgcttaatcactctatgatctcgttaggttcatgtaccatgaaactaaacgcg
accgctgaaatgatcccaattacctggcctgaatttgcaaaccttcacccattctgcccg
ctagaccaagcagaaggttaccaaataatgattaacgagctacacgattggctagttaac
attaccggttacgacgcggtttcattgcaaccaaattcaggtgcacaaggtgaatacgca
ggccttatcgcaattcgtaaataccacgagtcacgaggggatgcgcaccgtaacgtatgt
ttaatcccaagttctgcacacggtactaacccagcttcggcacaaatggccagcatgaaa
attgtggttgttaactgtgataaaaatggcaacatcgatatggaagacctaaaagcgaaa
gctgaagaagtctctgaaaacctatcatgtgccatggtaacgtacccatctacccacggt
gtatacgaagaaacgattcgtgaattatgtgaaattgttcaccagcatggtggccaagtt
tacatggatggcgcaaacatgaacgcgcaagtaggtgttactagcccaggcttcattggc
tcagatgtgtcgcacttaaacttacataaaaccttctgtattccacacggtggcggcggc
ccaggtgttggcccaattggtgttaaatcgcaccttgcgccatttatgccaaaccacagc
gtaattaacgtaccaggtactaatgaaggaaatggtgcagtatcggcagcgccttacggc
tctgcagctattttacctatttcatgggcttatattgccatgatgggctctgaaggctta
aaacaagcgacagaaatggcgattgtaaatgctaactacttaagcaatgagctcagcaag
cacttcccaattttataccgtggccgtaataatcgtgttgctcacgaatgtattattgac
ctacgcccattaaaagaagcctcaggcattactgaaatggacgttgctaagcgcttacaa
gattatggtttccactcaccaacaatgtcgttcccagtagcgggcacattaatgattgag
ccaacagaatctgagtctaagggcgagattgaccgctttatcgaagcgatggtatcgatt
aaaggtgaaatcgataaaatcatttcaggtgaatggtctatcgaaaacaacccactggta
tttgcaccacacacgcaagccgatgtgctaggtaatgaatgggatcgtgcgtatgaccgt
ttttacgctgccttcccagtaccagcagttgctaaagataagttctggccaacggttacg
cgtatcgatgacgtatacggcgaccgtaatttagtatgttcatgcccagcggttgagact
tatcgcgactaa
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