Pseudoalteromonas sp. SM9913: PSM_A0559
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Entry
PSM_A0559 CDS
T01374
Name
(GenBank) conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psm03032
]
PSM_A0559
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A0559
Enzymes [BR:
psm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSM_A0559
DNA replication proteins [BR:
psm03032
]
Prokaryotic type
DNA Topoisomerases
PSM_A0559
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSM_A0559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RGS
Motif
Other DBs
NCBI-ProteinID:
ADT67511
LinkDB
All DBs
Position
I:591508..592491
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AA seq
327 aa
AA seq
DB search
MKLIYVDDNLPGITRKRHENQWVYYDPAGKKIHDKDEVERLDSLAFPPAYKDVWLCPEEN
GHILATGYDSKGRKQYFYHPEFREQQELKKFEACALFGNKLPLLRAKLSEYLRGNELDYQ
RTIAAVVRLMDLGALRVGSKKNAKHNNSFGATTLRSRHAKLTGKNIRLKYKAKSGKQREV
NITDKVLSSIIQQLQDLPGQSLFQYIDEGEYCDVTSKEVNEFIQSVMGEQFSAKHFRTWR
ASVLAFEVLHKSNGQLSLKDMLDSVSSNLGNTPAIARNSYIHPKLIELYKGGKEALKDFN
NLDKLPRKTKYLSRYERGLLIFLEEQC
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatttatgtcgatgataacttgccgggcataactcgtaagaggcatgaaaac
caatgggtttattatgatcctgcaggaaagaaaatacatgataaagatgaagtagagcgg
ttagacagcctcgcttttccccccgcatacaaagatgtatggttatgtccagaagaaaat
gggcatattttagctactggctacgacagcaaaggccgcaagcaatacttttatcatccc
gagtttagggagcagcaagagcttaaaaagtttgaagcatgtgctttatttggaaataaa
ctgcctttgttaagagcaaaactatcggaatatttgcgaggtaatgagcttgattaccag
cgcacaattgcagccgttgtacgtttaatggatcttggagccctgcgcgttggctctaaa
aaaaatgccaaacataataatagttttggtgctacaacattgcgtagccggcatgcaaaa
ctaactggtaaaaatattcgcttaaagtataaagcaaaatccggtaagcaaagagaagtg
aacataacagataaagtgcttagctctatcatacagcagttgcaagatttgcctgggcag
agcctattccaatatatcgatgaaggcgagtattgtgatgttacctccaaagaggtgaat
gagtttattcaaagtgttatgggcgagcagtttagtgcaaaacattttagaacatggcgg
gccagtgttttggcatttgaagtcttacataaatcaaacggccagctttcgcttaaagat
atgttagatagcgtttcaagtaatttagggaataccccagcaatagctcgtaattcatat
attcatccaaagttgattgagctgtataaaggaggcaaggaagctctaaaggactttaat
aacttagacaaactaccccgtaagactaagtacctgagtcgctatgaacgtgggttgttg
atatttttagaagaacaatgctaa
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