Pseudoalteromonas sp. SM9913: PSM_A0941
Help
Entry
PSM_A0941 CDS
T01374
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A0941
Enzymes [BR:
psm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSM_A0941
DNA repair and recombination proteins [BR:
psm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSM_A0941
Prokaryotic type
PSM_A0941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADT67889
LinkDB
All DBs
Position
I:complement(999349..1000878)
Genome browser
AA seq
509 aa
AA seq
DB search
MRIKINIVWFKRDLRLSDHQPLKNAFSNGLPTLLIYNFEPLLLDDAHYNERHWRFVYQSI
CDLNTQLARFNSRVYIFNEDMQTLLESLHSQFEITNLFSHQEIGLNNTFERDIAIKAWCQ
HHHINWLESPTGAVIRGKRNRSNWNERWQQTMQAPIAIPNWKQIKPLTLTDYQTPILPSA
YTQDNEHFQHGGPRLAREVMQSFFAERGKGYQKGISSPSLSRTHCSRLSPYLAWGNISLR
QVYQMAIDAYHSTSADKKGWKRPLAAFVSRLHWHCHFMQKFESECTMEFKALNPGYHAFP
YRDDAQVTSDIERWAQGQTGIPIIDACMRCLKATGYINFRMRAMLVSFVTHHLNISWQQA
SFPLANYFLDFEPGIHYPQIQMQASVTGINTIRHYNPIKQSEDQDPTGAFIKKWCPELEK
LPIEYLHQPWEQTPMEALFNDFKLGEDYPEPMLDLTTASKEARERLWQYRERPDVKRAIG
KILKKHVAPTQKITRVKRKTRSNSNKENT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcgcataaaaataaacatagtctggtttaaacgtgacttacgcctaagcgatcatcag
cctttaaaaaatgcgtttagtaacggcctgcctaccctcttaatttataatttcgaacct
ttactacttgacgatgcgcattacaacgagcggcattggcgctttgtatatcaatctatt
tgcgacttaaacactcagttggctcgctttaacagccgcgtatatatatttaatgaagat
atgcaaaccctacttgaatcgcttcactcgcagtttgaaatcacaaacctctttagccac
caagaaatagggctaaacaatacctttgagcgtgacatagcaattaaagcctggtgccaa
caccatcacattaactggttagagtcgccaaccggggctgtgatacgtggcaaaagaaat
cgcagtaattggaacgagcgctggcaacaaaccatgcaagcacctattgctatacctaat
tggaagcaaataaaaccacttactcttactgattatcaaacacctatactgccgagcgcc
tacacgcaagataatgaacattttcagcacgggggccctcgacttgcccgtgaagtaatg
caaagcttttttgctgaacgcggtaagggttatcaaaaaggaatatccagcccaagctta
agccgtacgcattgctctaggttatcgccctatttagcgtggggaaatatcagcctgagg
caagtgtatcaaatggcgattgacgcataccatagcacttctgctgataaaaaagggtgg
aagcgcccacttgccgcgtttgtatcacgcttgcattggcattgccattttatgcaaaag
tttgaaagcgaatgcaccatggaatttaaagcgctaaatccgggttaccatgcatttccg
tatcgtgatgacgcccaggttactagcgatattgaacgctgggcacaggggcaaactggt
attcctattattgatgcctgcatgcgctgtttaaaagccaccggttatattaattttaga
atgcgcgctatgctagttagctttgtaacgcatcatttaaacatcagctggcaacaggca
agttttccgctggctaattactttttagactttgaaccgggaattcattacccacaaatt
caaatgcaagcctctgtcaccggtattaataccattcgtcattacaacccaataaagcaa
tcggaggatcaagacccaaccggtgcgtttataaaaaaatggtgccctgaacttgaaaag
ctccccattgaatatttacatcaaccttgggagcaaacgcccatggaagcgctatttaac
gactttaaactaggtgaagactaccctgagccgatgcttgatttaaccaccgcctcaaaa
gaagcccgcgaacggctatggcaataccgagagcggcccgatgtaaaacgcgccataggt
aaaattcttaaaaaacacgtagctccgactcaaaaaatcacccgtgtaaaacgcaaaact
cgcagtaacagcaataaagagaacacctaa
DBGET
integrated database retrieval system
