Pseudoalteromonas sp. SM9913: PSM_A0949
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Entry
PSM_A0949 CDS
T01374
Name
(GenBank) LysR transcriptional regulator
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psm03000
]
PSM_A0949
Transcription factors [BR:
psm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSM_A0949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_30
HTH_24
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADT67897
LinkDB
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Position
I:1010119..1011036
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AA seq
305 aa
AA seq
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MKVSFEQLKSMVVFAQIVEQGSLTAAAKQLGLTRAVASYHLKKLETQLEVTLLNRSTRTM
ALTEAGMAYYERCRVITEQANAANQQIENIKSEPQGLLKISCPVNVGMQLIVPAINTFKR
QYPKIDIDLQLTDDVVDIIKHGFDFAIRGVALRDSNLQATKLTTMSTCICGAPDYFAHFG
KPTTPDELVKHQWVVYQLGSKTLTLQKEGKKVDITMQGSLSTNNAAARTAFVEAGHGLGR
IPLYDAWPKVQAGLLQIILDDYKSKDIELYGVFPPGAAGSKKLRLFIDYLKAYFVKQHTA
LGMLK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctcgtttgaacagttaaaaagcatggtggtatttgcacaaattgtagagcag
ggcagcttaactgcagcggcaaaacaattagggctgacccgtgctgtagcgagttatcac
ttaaaaaaattagaaacacagctcgaagtgacgctacttaaccgttctacccgcaccatg
gcgctaaccgaagccggaatggcctattatgagcgttgccgtgttattacagagcaagct
aatgccgctaatcagcaaatagaaaatataaaaagcgaaccccaagggctattaaaaata
agctgccccgtaaatgtggggatgcagttgattgtaccggcaataaatacctttaagcgc
cagtaccctaaaattgatatagatttacagctcacggatgacgttgtggatattattaag
cacgggtttgattttgcgattagaggggttgcactgcgcgattcgaacttacaagccact
aagctcactactatgagcacgtgtatttgtggtgcgcccgattattttgcgcattttggc
aaacccactacacccgatgagttggtaaagcatcagtgggtggtttatcaattaggtagt
aaaacgctgaccttacaaaaagaaggcaaaaaggtcgatattacaatgcaaggtagttta
agcaccaataacgctgctgcacgcactgcgtttgtagaggcggggcatggtcttggccgt
attccactttacgatgcatggccaaaagtacaagcgggtttgctgcaaattatacttgat
gattataaaagcaaagacattgagctttatggggtgttcccgcctggggcggcgggctct
aaaaaactgcgtttgtttattgattatttaaaagcgtattttgtaaagcaacataccgca
ttaggtatgcttaaataa
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