Pseudoalteromonas sp. SM9913: PSM_A1008
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Entry
PSM_A1008 CDS
T01374
Symbol
clpB
Name
(GenBank) ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psm03110
]
PSM_A1008 (clpB)
Chaperones and folding catalysts [BR:
psm03110
]
Heat shock proteins
HSP100
PSM_A1008 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
NBD_SMAX1
nSTAND3
TniB
IstB_IS21
AAA_24
ATPase_2
AAA_18
Zeta_toxin
AAA_7
bpMoxR
NACHT
KIP1
DISC1_C
Motif
Other DBs
NCBI-ProteinID:
ADT67953
LinkDB
All DBs
Position
I:1067118..1069694
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AA seq
858 aa
AA seq
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MRLDRFTSKFQSALSDAQSLALGRDHQFIEPVHLMYALLKQSGSSVRALFAQMSISVDEL
NTKLSQEIEKLFKVEGVGGDVQLSNNMVSLINLCDKYAQKRKDKYISSELFVLVACEDKG
PLGSVFKALNITASKVETAIEAIRGGQKVDDPNAEETRQALEKYTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSL
DLGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLK
PALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELH
HSVEITDPAIVAAAQLSHRYISDRQLPDKAIDLIDEAGSSIRLQIDSKPEALDKLERRII
QLKIEDNALAKEKDEASQKRRTEMVELITELEGQYRELDEVWNAEKASLQGTQVIKAELE
QARLDLEVARRASDLQRMSELQYGRIPELERKLDLASQAEMQEMSLLKNQVGEDEIAEIL
SRWTGIPVARMLQGEREKLLQMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELTKALAGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL
GSDIIQEQAGSNDYDELKAKVMGVLHNEFRPEFINRIDETVVFHSLSHSHIKEIADIQLS
KLRQRLTEMGYLLELTDAALERIAASGFDPVYGARPLKRAIQQTIENPLAQKLLNNEFQP
GCIIVIDANEDGLVFTSR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagatagatttacaagtaaatttcagtctgcgctttcagatgcgcaatcatta
gcgctaggtcgcgatcatcaatttattgaacctgtgcatctaatgtacgctttgttaaaa
caaagcggctcaagtgtacgtgcactatttgcacaaatgagcatcagcgttgatgaactc
aacactaaattatcacaagagatagaaaagttatttaaagtggaaggtgttggtggcgat
gtacagttgtcaaataacatggtgtcactgataaacctatgtgataaatacgcccaaaag
cgtaaagataaatacatttcaagtgagttgtttgtattagttgcgtgtgaagataaaggt
ccgcttggcagtgtttttaaagcacttaacattactgcgagtaaggttgaaacggcaatt
gaggcgattcgtggtggccaaaaagttgacgatcctaatgcggaagaaacacgccaagca
cttgaaaagtacaccatcgatttaactgagcgtgcagagcaaggtaagcttgaccctgta
atcggtcgtgatgatgaaattcgccgcactattcaagtattacaacgccgtaccaaaaat
aaccctgtgttaattggtgagccaggggtgggtaaaacagccatagctgaagggcttgca
cagcgtattattaatggtgaagtgcctgagggcttaaaaaacaagcgcgtattatcactt
gatttaggcgcattagttgctggtgcaaaataccgaggtgaatttgaagagcgtttaaaa
tcagtacttaatgagttggctaaagaagaaggacaagttattttatttattgatgaaatt
cataccattgttggtgctggtaaaagtgatggcgctatggatgcgggtaacatgttaaaa
cctgccttagcacgcggtgaactccattgcgtaggcgcaaccactttagatgaataccgt
aaatacattgaaaaagatgctgcgcttgagcgccgtttccaaaaggtattaatagaagag
ccttcagtagaagacaccattgctattctgcgtggcttgaaagagcgttacgaattacac
cattcagtggagatcaccgaccctgcaatcgttgccgcagcgcagttatcgcatcgttat
attagtgatcgccaattacccgataaagcaatcgatttaattgacgaagcgggctcttct
attcgcttgcaaattgattcaaagccagaagctttagataaattagagcgtcgcattatc
caattaaaaattgaagataacgcattggccaaagagaaagatgaagcaagtcaaaagcgc
cgtacagaaatggtcgagctgatcactgagcttgaagggcaataccgtgaactagatgaa
gtatggaatgcagaaaaagcgtctttacaaggcacgcaggttattaaagctgagctagag
caggcacgacttgatttagaagtggctcgcagagcaagtgacttgcagcgtatgtctgaa
ctgcaatatggacgtatacctgagcttgagcgcaaactcgatttagcatcacaagcagaa
atgcaagaaatgagcttgcttaaaaatcaggtgggcgaagatgaaattgcagaaatttta
tcacgttggaccgggatcccagtggcgcgtatgctccaaggtgaacgtgaaaaactatta
caaatggaagagcagttacataacaaagtcattggtcaagatgaggccgtcgttgcggtg
gctaatgccattcgtcgttcgcgtgcagggcttgctgatcccaatcgtccaattggctcg
ttcttatttttagggcctacaggggttggtaaaacagaacttaccaaggcactagcaggc
tatatgtttgataccgaaagtgccatggtgcgtatagatatgtctgagtttatggaaaaa
cactcagtcgcacgtctagtcggtgcgcctccagggtacgtaggttacgaagaaggtggt
tatttaaccgaagctgttcgtcgtaaaccctattcggttattttgcttgatgaaatagaa
aaagcgcatccagatgtgtttaatattttattacaagtccttgatgacgggcgtttaacg
gatggccaagggcgtacggttgattttaaaaatacggttatcattatgacctccaacttg
ggctcagatatcattcaagagcaagcgggaagtaatgactatgacgagcttaaagcaaaa
gtcatgggtgttttacataatgaatttagacccgagttcattaaccgtattgatgaaact
gtggtatttcactcactttcacatagtcatattaaagaaattgcagatattcagttaagc
aaattacgtcaacgattgacagagatggggtatttacttgagttgacagatgctgctctt
gagcgaattgctgccagtggctttgatcctgtctatggcgctcgtccacttaaacgggca
atacagcaaaccattgaaaatccattagcacaaaaactgcttaataatgaatttcaacca
ggttgtatcattgtcattgatgctaacgaagacggcttagtgtttacgagtcgataa
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