Pseudoalteromonas sp. SM9913: PSM_A1014
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Entry
PSM_A1014 CDS
T01374
Symbol
ffh
Name
(GenBank) 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm02024
Quorum sensing
psm03060
Protein export
psm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSM_A1014 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSM_A1014 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSM_A1014 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psm02044
]
PSM_A1014 (ffh)
Enzymes [BR:
psm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PSM_A1014 (ffh)
Secretion system [BR:
psm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSM_A1014 (ffh)
Eukaryotic Sec-SRP protein
PSM_A1014 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
cobW
AAA_33
YqeC
APS_kinase
KTI12
AAA_31
ATP_bind_1
AAA_24
AAA_26
TsaE
AAA_14
FliD_C
SpoU_sub_bind_like
ABC_tran
AAA_16
Helicase_RecD
Thymidylate_kin
AAA_30
PRP9_N
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ADT67959
LinkDB
All DBs
Position
I:1076708..1078087
Genome browser
AA seq
459 aa
AA seq
DB search
MFENLQERLGKTLKNISGRGRLTEDNIKDTLREVRMAFLEADVALPVVREFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGEANEELSLNAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLATEVNVEFFPSDISQKPVDIATAAISHAK
KKFIDVVLVDTAGRLHVDSDMMDEIKALHHAINPIETLFVVDAMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFMGVGERTDALEPFHPDRIASRILGMGDV
LSLIEEVEMKVDKEQAAKVAQKVFKGDGFTLDDFADQLKQMKNMGGMMSMLDKLPGMQNI
PDAVKGQMGDKTFIQMEAIISSMTKKERARPEIIKGSRKKRIAAGSGTQVQEINKLLKQF
TQMQKMMKKMKGKGGMQKMMRGMKGMLPPGMMGGGGPKF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctccaagaacgattaggtaaaaccctaaaaaatattagtggccgtggt
cgcttaactgaagacaacattaaagatacacttcgtgaagtgcgaatggcatttttagaa
gccgatgtggcgttgcctgttgttcgcgagtttgtaaagcaagttaaagagcgtgcggtt
ggtgttgaagtcaccaaaagcttgagccctggccaagtatttataaaaattgttcgtgaa
gaacttgaaaaagccatgggtgaagctaacgaagagctaagccttaacgcacagccgcca
gcggtagtgatgatggctggtcttcaaggtgcgggtaaaaccaccagtgtgggtaagctg
gctaagtttttaaaagagcgcaagaagaagtctgtgctagtggtgagtgccgatgtgtat
cgtccagcggcaattaagcaattagaaaccttagcaacagaagttaatgtagaatttttc
ccaagtgatatttcgcaaaaaccagttgatattgcaactgccgccatttctcatgcgaaa
aagaaatttattgatgttgtattagtcgatactgcgggtcgtttgcatgttgatagcgac
atgatggatgaaattaaagccttgcatcatgcaattaatccaatcgaaacgctattcgtt
gttgatgcaatgacaggtcaagatgcggcaaatacagcaaaagcatttgacgaagcttta
ccgctgaccggtgtgatactgactaaaacagatggtgatgcccgaggtggtgctgcttta
tctattcgtcatattactggtaagccaattaaatttatgggtgtgggtgagcgcactgat
gcccttgagcctttccacccagaccgaattgcttcacgtattttaggcatgggtgatgta
ctttcattaatcgaagaagtcgagatgaaagtagacaaagaacaagcggcaaaagtagca
caaaaagtatttaaaggtgatggctttacgctggatgactttgctgatcaattaaagcaa
atgaaaaacatgggtggcatgatgtcgatgctcgataaactgcctggcatgcaaaacatc
ccagatgcggttaaagggcaaatgggtgataaaacctttattcaaatggaagcgattatt
agctctatgaccaaaaaagagcgtgcacgcccagaaatcatcaaaggttcgcgtaaaaag
cgtattgctgcgggctctggtacgcaagtacaagagatcaataaactgcttaagcaattt
acgcaaatgcaaaaaatgatgaagaagatgaaaggtaaaggtggcatgcaaaaaatgatg
cgtggcatgaaagggatgttaccacctggcatgatgggtggcggtggtccaaaattttaa
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