Pseudoalteromonas sp. SM9913: PSM_A1069
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Entry
PSM_A1069 CDS
T01374
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psm
Pseudoalteromonas sp. SM9913
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psm03016
]
PSM_A1069 (truB)
Enzymes [BR:
psm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSM_A1069 (truB)
Transfer RNA biogenesis [BR:
psm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSM_A1069 (truB)
Prokaryotic type
PSM_A1069 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADT68012
LinkDB
All DBs
Position
I:1136223..1137167
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AA seq
314 aa
AA seq
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MARRSKGRPVDGILLLNKPEGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEVVETRDVNVTAELLTQEIAKFLGESDQ
YPSMYSALKYEGKPLYKYAREGIEVPRKCRKINVFSLTLDEFDEQANEIQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRSAVGHYPADKMVTLEQLETLLNQAKEQDVAPSTYLDE
LLLPMDTALVDLPVVEITKEQGIAFSHGQAVVLGKELPEGAIKVLADGIFIGTGERNPDG
HLKSKRGLSNQQPE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcagtaaaggccgtccagttgatggtattttgttgttaaacaaaccagaa
ggtatttcatcaaacaaagcactgcagcaagcgaaaggtatttattttgctcaaaaagca
gggcacactggtgcgctcgatccgcttgcgaccggtatgctgcctatttgttttggtgaa
gccactaagtttacccagtttttactcgatacagataaaacctatgttgtgcgagcaaaa
ctgggtgagcgtactaccacgtcagactctgatggtgaagtggtcgaaacgcgtgatgtt
aatgttactgctgaactgcttacacaggaaattgctaaatttttaggtgagtcagatcaa
tacccatcaatgtactcagcgcttaaatatgaaggcaagcctttatataaatacgcgcgc
gaaggcatagaagtccctcgtaagtgtcgaaaaattaacgtatttagcttaacgcttgat
gagtttgatgagcaagctaacgaaatacaaatgactgcccatgtatctaaaggcacgtat
attcgtactattgttgatgacttaggtgaaaaccttggctgcggcgcgcatgtgattatg
ctgcatcgtagtgctgtagggcattacccagcagataaaatggtcacacttgagcagtta
gaaacgttattaaatcaagcgaaagaacaagacgttgcgccttctacttaccttgacgaa
ctattattgccaatggataccgcgttagttgatttacctgttgtggaaattactaaagag
cagggaatagcatttagccatggtcaagctgtggtgctaggtaaagaattacctgaaggt
gcaataaaagttctggctgacggaatttttattggtactggtgaacgtaatcctgatggc
catctaaaatcaaaacgtggcttgtctaatcagcaaccagagtaa
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