Pseudoalteromonas sp. SM9913: PSM_A1202
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Entry
PSM_A1202 CDS
T01374
Symbol
recC
Name
(GenBank) exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSM_A1202 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psm03400
]
PSM_A1202 (recC)
Enzymes [BR:
psm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSM_A1202 (recC)
DNA repair and recombination proteins [BR:
psm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSM_A1202 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
IpgD
Motif
Other DBs
NCBI-ProteinID:
ADT68142
LinkDB
All DBs
Position
I:1286705..1290004
Genome browser
AA seq
1099 aa
AA seq
DB search
MLNIIQSNRMEALQAQFHQLLKVNPLQSPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV
DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPTCIDEPLYLPLKTYLEGDID
GQKTFALCEKIADVYDQYLMYRPHWIATWDSGVDTLDDVDISIAPWQPDLWRRLVKLSKT
LGQSQFHRANMQGQLLSALESMDSSLLPKRISLFGISAIASSQLDVFEALSKKTEVFLFF
FNPSEHYWGDIIDEKTAAKINAKYAKMPLVEAQQKKQTNPDEEYYFIGNPLLSSWGKLGR
DYFEQLVQLDARWIDGFIDAFDDTLLGQVQSEIYQLAFKGESLTDNKEWFINDEGKLPIS
ANDTSITLSDCHTPLREVERLHDYLLNLFNQNPTLTPKDIIVMMPDVGTYSPYIEAVFGG
AQGSRFIPYALADLAIEQEKPVLSSFASLANLPFSRFGVSDILDLLQVTQIAEKFGLEAH
EYEQIHYWLERVGVKWGINAEHKQSFDLPAIDLNTWQHGLNRLLLGIAMRDEQCPFNGIY
SADEVEGMALDTLNKLVHFIDVLQDFKAKLTPDDTLSNKAHILSELLNAVYESESDDSWD
LLVLQKVLEDIAKHHDNGDYSKAVSQRIVSYLIKQGIQEKGVGQRFLVGQVNFCTLMPMR
AVPFKVVCMLGLNDADYPRTVQPIGFDLVPYSKKQKGDRSRKLDDRYLFLEALLSARDNL
YMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFKLSEPSDKPLPECLITQQHLQPFNSLYY
SAPSDEQAGVNNHSYNPIWLPSEAIEPKAITALDVTPPELLDLDVFIRSVCHAQESFYQQ
SLGLRLPQFNDIAKDEEPFSLDALRRYFYLDEILEANINNTPLSTEQILQRGELPQANVG
SLIYEGMQHRVDALAGQVKEQIKAGKSEPIEVLLALENTTIEGWLNHVYMQKQVFYRSAS
IKAKDLIKGFLYHLAAQSMEQEVETLLLGLDKQISFAPMSKANADLLLADWFELYKALRN
APVAFFPVSGYEYVKSGGDMAKANSKFSPQYIGRGEGENPYIRLTVQSLNDCQEEFIQWS
EKLFVPLFEHAKESDYASA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatattattcaatcaaaccgaatggaagccctgcaagcgcagtttcatcagcta
ttaaaagtaaacccattgcaaagcccatttgataaagaagtggtgttagtgcaatcgccg
ggtatgtcgcagtggctaaaaattggtttaagtgaaaatttaggcgtggctgcgcaggta
gactttccgctgccgtcgagctttatttggcagttgtaccagcaactattgccaaacgtg
cctaaagagtcggcgtttaataaaccgaaccttgcttggaaactgtttgcaattttacct
acttgtattgacgagccactgtatttacccttaaaaacctatttagagggggatattgac
ggccaaaaaacctttgccctatgtgaaaaaatagccgatgtgtacgaccaatatttaatg
tatcgcccccattggatagccacttgggatagcggtgttgatacgcttgacgatgtagat
atcagcattgctccttggcaacccgatttgtggcgccgccttgtcaaattaagtaaaaca
cttgggcaaagccaatttcaccgcgccaacatgcaaggacaattactcagcgcccttgag
agtatggatagcagcttattgccaaagcgtattagcctatttggtatatctgcgattgcc
agctcacagcttgacgtgtttgaagccttgagtaaaaaaactgaggtgtttttattcttt
tttaaccccagcgagcattattggggcgatataatcgatgaaaaaacagcggctaaaata
aacgctaaatacgccaaaatgccgctggtggaagcgcagcaaaaaaagcaaacgaatcct
gatgaagaatactattttattggtaatccgttgttgtcgtcgtggggtaaactcggccgc
gattattttgagcaactggtgcagcttgatgcccgttggattgatggttttattgatgcg
tttgacgataccttacttgggcaagtgcaaagcgaaatataccaacttgcctttaaaggt
gaatcgcttaccgataacaaagaatggtttataaacgatgagggtaaactgcccataagt
gcaaacgataccagcattacgttaagtgactgccacacaccattaagggaagtcgagcgc
ctgcacgactacttactcaatttgtttaatcaaaacccaacgcttacccccaaagacatc
atcgtcatgatgcctgatgtaggtacttatagcccttacattgaggccgtttttggtggt
gcgcagggcagccgatttataccatacgcccttgccgatttagccatagagcaagaaaaa
ccagtactgagctcgtttgccagtttagctaatttaccgttttcgcgctttggcgtgtcg
gatattcttgatttattacaggttacgcaaattgccgaaaaatttggcctagaagcccat
gaatacgagcaaatacattattggcttgagcgagtaggggtaaagtggggcataaacgct
gagcataaacaaagctttgatttacccgccattgatttaaatacctggcaacatggcttg
aaccgtttattactggggattgccatgcgcgacgaacagtgcccatttaatggtatttac
agcgccgatgaagtagaaggtatggcgcttgatactctcaataagctggtgcattttatt
gatgtgcttcaagactttaaagcgaaactcacccctgatgatacgctttctaataaagcc
catatattaagtgagctactcaatgctgtgtatgagagcgaaagcgatgatagctgggat
ttattagtgctgcaaaaggtgctcgaagatattgcgaagcaccacgacaacggcgactac
agtaaagccgtttcgcagcgcatagtgagctatctaatcaagcaaggtatacaagaaaaa
ggtgtaggtcagcgctttttagtaggacaagtgaacttttgtacgttaatgccaatgcgc
gccgtgccgtttaaggtggtgtgtatgctaggcttgaacgatgccgattacccacgtacc
gtgcagcctatcggttttgacttagtaccttattctaaaaagcaaaaaggtgaccgttca
cgtaaactcgatgaccgttacctctttttagaagcgctcttaagtgctcgagataattta
tatatgagctacattggccgctcgtgttttgacaaccagccgcgcatgccatcaactcta
gtaagtgagcttttagaatacattggacgcagttttaaacttagcgaacccagtgataaa
cccttgcctgaatgccttattacgcagcagcatttgcagccttttaatagcctgtattac
tcagctcctagcgatgaacaggcgggagtaaataatcacagctataacccaatttggctg
cctagcgaggctattgagccaaaagcaatcactgcgcttgatgtaacaccccctgagcta
cttgatcttgatgtgtttattcgtagtgtatgccatgcccaagagagcttttatcaacaa
agtttagggttacgcttgccgcaatttaacgatatagcgaaagacgaagaaccgtttagc
ctagatgcgctgcgccgttatttttaccttgacgaaatacttgaagcaaacattaacaat
acgccgctcagtaccgagcaaatactgcagcgcggtgagttgccccaagccaatgttggc
agcttaatttatgagggtatgcagcaccgagttgatgcgcttgcagggcaagtaaaagag
caaataaaagccggtaaaagcgaaccgatagaagtgttacttgcgcttgaaaataccacc
attgaaggctggcttaaccatgtgtatatgcaaaaacaagtgttttaccgcagtgccagt
attaaagccaaagatttaataaaaggctttctttatcacctggcagctcaaagcatggaa
caagaggttgaaaccttattactgggtttagataaacaaattagctttgcccctatgagt
aaagccaatgccgacttgctgcttgcagattggtttgaactatacaaagcattgcgaaac
gcgccggtggcgttttttccggtgagtggttacgaatatgtgaaaagcggtggcgatatg
gcaaaagctaacagtaaatttagcccacagtatattggccgaggtgaaggggaaaaccct
tatattcgtctcacggtgcaatcgctcaatgattgccaagaggagtttatacaatggagc
gaaaaattatttgtcccgttatttgagcacgccaaggagagtgactatgcaagcgcttaa
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